monarch-initiative / monarch-app

Monarch Initiative website and API
https://monarchinitiative.org/
BSD 3-Clause "New" or "Revised" License
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Error loading `dc:terms` node #916

Open ptgolden opened 9 hours ago

ptgolden commented 9 hours ago

This is a very small issue, but dc:terms is an entity in the KG but an error is thrown when loading it in the UI (https://monarchinitiative.org/dc:terms)

caufieldjh commented 9 hours ago

I think that shouldn't be in the KG anyway. This could be filtered out upstream in KG-Phenio (I see other related nodes there, like dc:title)

ptgolden commented 9 hours ago

That's great too! Maybe it would be worth doing an inventory of terms that don't make sense to include in the graph.

ptgolden commented 9 hours ago

In any case, it still may be good to figure out why this term has an error loading, in case it's a bug that could pop up with other entities.

ptgolden commented 9 hours ago

Here's a count of entities by the CURIEs:

        "NCBIGene",196298,
        "MGI",157897,
        "ZFIN",90320,
        "RGD",65695,
        "GO",51502,
        "UPHENO",49336,
        "WB",48776,
        "Xenbase",46395,
        "HGNC",43873,
        "ZP",43523,
        "FB",30244,
        "MONDO",29466,
        "FBbt",28235,
        "Reactome",21726,
        "XPO",20340,
        "HP",18391,
        "UBERON",15937,
        "dictyBase",14222,
        "MP",14206,
        "CLINVAR",11778,
        "EMAPA",8765,
        "FYPO",8061,
        "OBA",8029,
        "WBbt",7555,
        "SGD",7167,
        "PomBase",5134,
        "CHEBI",4584,
        "ZFA",3217,
        "MA",3068,
        "WBPhenotype",2649,
        "NCBITaxon",1899,
        "CL",1777,
        "PR",1102,
        "DDPHENO",1017,
        "NBO",934,
        "PATO",663,
        "RO",547,
        "MPATH",280,
        "HSAPDV",259,
        "CHR",203,
        "DDANAT",135,
        "OBO",98,
        "BSPO",84,
        "IAO",81,
        "PO",67,
        "SO",52,
        "NCIT",41,
        "BFO",39,
        "ZFS",38,
        "ECO",36,
        "UBPROP",31,
        "TS",28,
        "ENVO",22,
        "ECTO",17,
        "OBI",15,
        "OMO",13,
        "OIO",12,
        "MFOMD",6,
        "GENO",5,
        "FOODON",4,
        "LINKML",4,
        "MF",4,
        "CARO",3,
        "owl",3,
        "COB",2,
        "GOREL",2,
        "MAXO",2,
        "MEDGEN",2,
        "OGMS",2,
        "PROV",2,
        "UMLS",2,
        "dcterms",2,
        "foaf",2,
        "rdfs",2,
        "APO",1,
        "CIO",1,
        "CLO",1,
        "DOID",1,
        "FBcv",1,
        "FMA",1,
        "Orphanet",1,
        "PCO",1,
        "PHENIO",1,
        "PW",1,
        "RNORDV",1,
        "SEPIO",1,
        "SNOMED",1,
        "TO",1,
        "XAO",1,
        "dc",1,
        "dcat",1,
        "dctypes",1