monarch-initiative monarch-cypher-queries issues

monarch-initiative / monarch-cypher-queries

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Disease to pathway inference query

#40 kshefchek opened 3 years ago
1
Bump junit from 4.12 to 4.13.1

#39 dependabot[bot] closed 4 years ago
0
adding datasets endpoint, cruft clearing

#38 kshefchek closed 4 years ago
0
Remove join genotype->disease->phenotype

#37 kshefchek closed 5 years ago
1
remove variant phenotype inferred through disease

#36 kshefchek closed 5 years ago
0
Remove literature-x paths for latest release

#35 kshefchek closed 5 years ago
0
Updates for 201907 release

#34 kshefchek closed 5 years ago
0
Replace unions with collect unwind

#33 kshefchek closed 5 years ago
0
Model gene is missing data

#32 kshefchek opened 5 years ago
0
Make sure genotype to phenotype has a relation

#31 kshefchek closed 5 years ago
1
Change closure relations for features

#30 kshefchek closed 5 years ago
0
Break out causal gene to disease

#29 kshefchek closed 5 years ago
0
Create variant label

#28 kshefchek closed 5 years ago
4
Filter out infrequent phenotypes for human G2P

#27 kshefchek closed 6 years ago
0
use part-of in closure for GO

#26 cmungall closed 6 years ago
1
GO closure should always include part_of

#25 cmungall closed 6 years ago
0
Include subject_original and object_original

#24 cmungall opened 7 years ago
1
Question: should we define tighter constraints for gene to phenotype query paths/joins

#23 kshefchek opened 7 years ago
3
Return a representative relation for path

#22 kshefchek closed 7 years ago
0
Remove distinct and union

#21 kshefchek closed 7 years ago
1
Remove distinct and use UNION ALL in golr queries

#20 kshefchek closed 7 years ago
0
clean up; add upper bounds

#19 kshefchek closed 7 years ago
0
Add upper bound between sequence features and genotypes

#18 kshefchek closed 7 years ago
1
Remove deprecated cypher syntax (start, planner) from dynamic queries

#17 kshefchek opened 7 years ago
0
Fixing what I think is a typo

#16 cmungall closed 7 years ago
0
Clean up dynamic queries

#15 kshefchek opened 7 years ago
0
Update yaml confs for to swagger 2

#14 kshefchek opened 7 years ago
1
[#12] Fix unit tests for latest scigraph compatibility

#13 benwbooth closed 7 years ago
1
Fix unit tests for latest scigraph compatibility

#12 kshefchek closed 7 years ago
2
Scigraph update

#11 jnguyenx closed 7 years ago
0
Check logic of phenotype-pathway query

#10 kshefchek opened 7 years ago
3
Add gene-tissue association data in golr queries

#9 kshefchek closed 7 years ago
1
feature-location query causes swapping

#8 jnguyenx closed 7 years ago
1
Ensure all associations have relations

#7 cmungall opened 7 years ago
8
Add travis tests

#6 cmungall opened 7 years ago
0
Added 3 paths for gene-GO

#5 cmungall closed 7 years ago
0
all genotypic elements should be traversible to one another

#4 cmungall opened 7 years ago
0
gene-disease does not include is-model-of via genotype

#3 cmungall opened 7 years ago
0
update HPO query examples

#2 kshefchek closed 7 years ago
0
Add sandbox for ontology queries

#1 kshefchek closed 8 years ago
0