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monarch-initiative / monarch-disease-ontology-RETIRED

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NCIT_C7430 Malignant Exocrine Pancreas Neoplasm #283

Closed nicolevasilevsky closed 6 years ago

nicolevasilevsky commented 7 years ago
NCIT_C7430 Malignant Exocrine Pancreas Neoplasm SubClassOf DOID_1795 tumor of exocrine pancreas

image

nicolevasilevsky commented 7 years ago

DO has an exact syn that xrefs the NCIT term image

cmungall commented 7 years ago

Which DO class?

cmungall commented 7 years ago

OK, there is actually some stuff to fix with Orphanets xrefs here, but let's stick to DO for now

image

Note DO places tumor as a subclass of cancer. This causes probs when when we follow the DO xref and make equivalent to the malignancy-generic neoplasm in NCIT

   is_a NCIT:C4445 ! Pancreatic Exocrine Neoplasm
      is_a NCIT:C41247 ! Pancreatic Mucinous-Cystic Neoplasm
      is_a NCIT:C41248 ! Pancreatic Serous Neoplasm
      is_a NCIT:C4613 ! Benign Exocrine Pancreas Neoplasm <---- includes benign!
      is_a NCIT:C7412 ! Pancreatic Precancerous Condition
      is_a NCIT:C7430 ! Malignant Exocrine Pancreas Neoplasm
      is_a NCIT:C95505 ! Pancreatic Intraductal Neoplasm
      is_a NCIT:C95542 ! Pancreatic Acinar Cell Neoplasm
nicolevasilevsky commented 7 years ago

DOID_1795 tumor of exocrine pancreas

nicolevasilevsky commented 7 years ago

(in every case, I am referring to the DO class at the top of the ticket)