Closed amc-corey-cox closed 2 years ago
This is still broken. I think I still have some file format issues.
Sorry for all the back and forth in the above. I'm a little confused by what is going on here. I'm re-adding the patch earlier which works on my system now. I believe this will fix the issue and the previous problem was something transient, like a failed file download.
I'd like to implement the testing workflow for main on pull requests as well so we don't have to merge to main before we know if something is broken.
Merge pull request #13 from monarch-initiative/ensembl_ensgal Generate Monarch Gene Mapping #9
Run poetry run gene-mapping generate --download
FileNotFoundError: [Errno 2] No such file or directory: 'data/hgnc/hgnc_complete_set.txt'