monarch-initiative / monarch-ingest

Data ingest application for Monarch Initiative knowledge graph using Koza
https://monarchinitiative.org
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Issue 150 fix knowledge source provenance merged #297

Closed RichardBruskiewich closed 2 years ago

RichardBruskiewich commented 2 years ago

Full resolution of issue #150 including incorporation of the Pydantic models generated directly inside Biolink Model (pypi module) release 2.4.7 (dependancy upgraded...), plus significant clean-up of technical debt in MD docs and ingest YAML files. Largely removed source fields (replaced with node provided_by and edge primary/aggregator_knowledge_source fields; deleted all relation slot references; cleaned up subject/object references in Associations to simple strings, etc.)