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monarch-initiative / monarch-ingest

Data ingest application for Monarch Initiative knowledge graph using Koza
https://monarchinitiative.org
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Monarch-App Issue 438 add BioGRID ingest #549

Closed RichardBruskiewich closed 6 months ago

RichardBruskiewich commented 7 months ago

Substantially resolves issue https://github.com/monarch-initiative/monarch-app/issues/438

glass-ships commented 7 months ago

@RichardBruskiewich i've brought in the update for Monarch Ingest to Pydantic v2, and updated the imports for biogrid and its test, as well as the yaml to include the new header_prefix option.

This should get you unblocked - thanks for your patience!!