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monarch-initiative / monarch-legacy

Monarch web application and API
BSD 3-Clause "New" or "Revised" License
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Increase term coverage in ontologies for diseases, phenotypes, anatomy, and cell types #1451

Open jmcmurry opened 7 years ago

jmcmurry commented 7 years ago

Per aim 1 of R24 renewal here

pnrobinson commented 6 years ago

This may be relevant https://github.com/obophenotype/human-phenotype-ontology/issues/3388

jmcmurry commented 6 years ago

cc: @jpgourdine please comment and link as needed. @cmungall is there any improvement on cell types coverage? If so where?

jpgourdine commented 6 years ago

Increasing term coverage in ontologies for diseases at the molecular level by adding molecular phenotypes from metabolomics data here

jmcmurry commented 6 years ago

We need to keep an eye on cell ontology; single cell seq etc. but this element is out of scope for R24. For R24 we can speak more generally about community work and coordination eg. design patterns etc. cc: @dosumis

jmcmurry commented 6 years ago

We are pretty on track with this. New terms added to Uberon, HPO steady increase, 20K diseases added to MONDO. Related to the ticket about reporting.