monarch-initiative / monarch-legacy

Monarch web application and API
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zfish models not rendering in grid #399

Closed nlwashington closed 10 years ago

nlwashington commented 10 years ago

i can't seem to view the zfish models in the grid. for example, http://localhost:8080/disease/OMIM_142945 i chose Danio rerio, and the log showed it made a call like:

http://owlsim.monarchinitiative.org//searchByAttributeSet?a=HP:0000366&a=HP:0000006&a=HP:0000126&a=HP:0000272&a=HP:0000601&a=HP:0001360&a=HP:0003829&a=HP:0009914&a=HP:0011800&a=target&a=ZFIN&limit=100

but nothing rendered on the page... it doesn't even look like there's an empty json coming back. @cmungall is this a result of inhibiting zfish results, or some other problem?

boesb commented 10 years ago

Nicole, I’m debugging on /disease/OMIM_255800 right now for Zebrafish and I get results.

From: Nicole Washington [mailto:notifications@github.com] Sent: Monday, June 02, 2014 12:37 PM To: monarch-initiative/monarch-app Subject: [monarch-app] zfish models not rendering in grid (#399)

i can't seem to view the zfish models in the grid. for example, http://localhost:8080/disease/OMIM_142945 i chose Danio rerio, and the log showed it made a call like:

http://owlsim.monarchinitiative.org//searchByAttributeSet?a=HP:0000366&a=HP:0000006&a=HP:0000126&a=HP:0000272&a=HP:0000601&a=HP:0001360&a=HP:0003829&a=HP:0009914&a=HP:0011800&a=target&a=ZFIN&limit=100http://owlsim.monarchinitiative.org/searchByAttributeSet?a=HP:0000366&a=HP:0000006&a=HP:0000126&a=HP:0000272&a=HP:0000601&a=HP:0001360&a=HP:0003829&a=HP:0009914&a=HP:0011800&a=target&a=ZFIN&limit=100

but nothing rendered on the page... it doesn't even look like there's an empty json coming back. @cmungallhttps://github.com/cmungall is this a result of inhibiting zfish results, or some other problem?

— Reply to this email directly or view it on GitHubhttps://github.com/monarch-initiative/monarch-app/issues/399.

harryhoch commented 10 years ago

As do I, but IO see nothing for OMIM_142945.

Becky, please look into what comes up when there are no matches. I saw just the table, which was fine, but I also saw “FAQ”, which probably shouldn’t be there.

On 2 Jun 2014, at 12:39 PM, BeckyBoes notifications@github.com wrote:

Nicole, I’m debugging on /disease/OMIM_255800 right now for Zebrafish and I get results.

From: Nicole Washington [mailto:notifications@github.com] Sent: Monday, June 02, 2014 12:37 PM To: monarch-initiative/monarch-app Subject: [monarch-app] zfish models not rendering in grid (#399)

i can't seem to view the zfish models in the grid. for example, http://localhost:8080/disease/OMIM_142945 i chose Danio rerio, and the log showed it made a call like:

http://owlsim.monarchinitiative.org//searchByAttributeSet?a=HP:0000366&a=HP:0000006&a=HP:0000126&a=HP:0000272&a=HP:0000601&a=HP:0001360&a=HP:0003829&a=HP:0009914&a=HP:0011800&a=target&a=ZFIN&limit=100http://owlsim.monarchinitiative.org/searchByAttributeSet?a=HP:0000366&a=HP:0000006&a=HP:0000126&a=HP:0000272&a=HP:0000601&a=HP:0001360&a=HP:0003829&a=HP:0009914&a=HP:0011800&a=target&a=ZFIN&limit=100

but nothing rendered on the page... it doesn't even look like there's an empty json coming back. @cmungallhttps://github.com/cmungall is this a result of inhibiting zfish results, or some other problem?

— Reply to this email directly or view it on GitHubhttps://github.com/monarch-initiative/monarch-app/issues/399. — Reply to this email directly or view it on GitHub.


Harry Hochheiser University of Pittsburgh Department of Biomedical Informatics harryh@pitt.edu 412 648 9300

nlwashington commented 10 years ago

the owlsim service call i pasted in the original ticket had an error, it should have been:

http://owlsim.monarchinitiative.org//searchByAttributeSet?a=HP:0000366&a=HP:0000006&a=HP:0000126&a=HP:0000272&a=HP:0000601&a=HP:0001360&a=HP:0003829&a=HP:0009914&a=HP:0011800&target=ZFIN&limit=100

thankfully, with the new build, this is no longer an issue. both the service calls and the phenogrid work. i'm closing this ticket until we find the bug elsewhere.