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monarch-initiative / monarch-mapping-commons

Building a fully exectuable workflow for boomer
Creative Commons Zero v1.0 Universal
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Fix deploy pipeline #51

Closed matentzn closed 8 months ago

matentzn commented 8 months ago

Fix deploy pipeline https://github.com/monarch-initiative/monarch-mapping-commons/actions/runs/8030186076/job/21937295284

We need to think about how to deploy the new versions of the mappings moving forward.

@kevinschaper where are you pulling the mappings from exactly for ETL? from the Mapping Commons release?

glass-ships commented 8 months ago

we currently have a Jenkins job which generates the mappings and uploads them to the gcp bucket serving data.monarchinitiative.org/mappings, which monarch ingest pulls from directly

this likely won't work in a GitHub action as it still needs to download 11gb worth of data to generate the gene mappings

matentzn commented 8 months ago

Oh great, this is much better! Thank you!

Closing!