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monarch-initiative
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monarch-py
Monarch Python API
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docker not found running commands from tutorial
#109
rbuels
opened
8 months ago
0
no phenotypes for MS?
#108
oneilsh
closed
8 months ago
1
archive/move monarch-py
#106
glass-ships
closed
1 year ago
1
Small bugfix for node page served from monarch-py
#103
kevinschaper
closed
1 year ago
0
Remove a bracketzero from subject/object category, add a test for the node page response
#102
kevinschaper
closed
1 year ago
0
Look at supplying/sorting by evidence counts for associations
#100
kevinschaper
closed
1 year ago
1
Try out oak for semsim
#96
justaddcoffee
opened
1 year ago
5
Add association counts and hierarchy to entity results
#94
glass-ships
closed
1 year ago
0
Schema update
#93
glass-ships
closed
1 year ago
1
Remove `between` arg for associations
#91
glass-ships
closed
1 year ago
1
Associations accepts multiple values for some args
#90
glass-ships
closed
1 year ago
0
add --debug/--quiet flags to set log level
#89
glass-ships
closed
1 year ago
0
bump version, regenerate model & run formatting
#88
kevinschaper
closed
1 year ago
0
Remove unused source field from schema
#87
kevinschaper
closed
1 year ago
0
Fixes application of entity param relative to the direct param
#86
kevinschaper
closed
1 year ago
0
Filter nodes without names from search
#85
kevinschaper
closed
1 year ago
0
Fixes solr query syntax generated when filtering on multiple category/taxon values, adds test
#84
kevinschaper
closed
1 year ago
0
`entity` param for association queries may not be using closures correctly
#83
kevinschaper
closed
1 year ago
0
Allow multiple values using OR semantics on get_associations
#82
kevinschaper
closed
1 year ago
1
Remove identifier:true for labels in schema
#80
kevinschaper
closed
1 year ago
0
Add fields for closure expansion of qualifiers
#79
kevinschaper
closed
1 year ago
1
update dependencies
#78
glass-ships
closed
1 year ago
0
Inlining schema fix for generating typescript
#77
kevinschaper
closed
1 year ago
0
Make category field single valued in denormalized schema
#76
kevinschaper
closed
1 year ago
0
add facet field & facet query to search cli
#75
kevinschaper
closed
1 year ago
0
Update association table support for biolink 3.4, plus plus
#74
kevinschaper
closed
1 year ago
0
LinkML 1.5.3 update
#73
kevinschaper
closed
1 year ago
0
Handle association tables when subject_closure or object_closure is empty
#72
kevinschaper
closed
1 year ago
0
Fixes a small bug in association type mappings
#71
kevinschaper
closed
1 year ago
0
Removed unused fields from monarch-py Entity and Association classes
#70
kevinschaper
closed
1 year ago
3
association table support
#69
kevinschaper
closed
1 year ago
0
expanding input parameters for search method
#68
glass-ships
closed
1 year ago
1
Update model
#67
glass-ships
closed
1 year ago
0
schema enhancements, mostly setting required fields and adding descriptions
#66
kevinschaper
closed
1 year ago
0
Add OR statements all over for subject OR subject_closure / object OR object_closure so we can function without reflexive closures
#63
kevinschaper
closed
1 year ago
0
Add CLI options for log verbosity
#62
glass-ships
closed
1 year ago
2
fix tsv output when empty search results returned
#61
glass-ships
closed
1 year ago
0
Handle empty lists in tsv output
#60
kevinschaper
closed
1 year ago
1
association count slot usage fix
#59
kevinschaper
closed
1 year ago
0
Add directional labels to association counts
#58
kevinschaper
closed
1 year ago
0
Add association count support
#57
kevinschaper
closed
1 year ago
0
Add association counts to node response
#56
kevinschaper
closed
1 year ago
1
Add direct flag for solr associations query
#53
glass-ships
closed
1 year ago
0
Add autocomplete endpoint, fix search interface for search endpoint
#52
kevinschaper
closed
1 year ago
0
Fix Docker errors on non-Solr commands
#51
glass-ships
closed
1 year ago
0
Docker error when running `monarch --help`
#49
kevinschaper
closed
1 year ago
0
Add Rich output for tsv, version flag to cli
#48
glass-ships
closed
1 year ago
0
bump version
#47
glass-ships
closed
1 year ago
1
undo changes to model as gentypescript doesnt support metaobject yet
#46
glass-ships
closed
1 year ago
0
fix linkml schema, docs should build now
#45
glass-ships
closed
1 year ago
0
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