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monarch-initiative / monarch-semantic-similarity-profiles

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Create a goal for computing ic scores in Makefile #18

Closed matentzn closed 4 months ago

matentzn commented 6 months ago

IC scores should be computed before we run runoak similarity and passed in there using the ic-map parameter.

  1. Compute IC scores based on gene2phenotype annotations
  2. pass into phenio semsim process in makefile

See https://github.com/monarch-initiative/semsimian/issues/124#issuecomment-1996832650 for some context