monarch-initiative / mondo-ingest

Coordinating the mondo-ingest with external sources
https://monarch-initiative.github.io/mondo-ingest/
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Add the orphanet subset to the Slurp file #531

Closed joeflack4 closed 4 months ago

joeflack4 commented 4 months ago

Resolves #527

Overview

Adds rare disease subset information to slurp/ordo.tsv in a new column.

Pre-merge checklist

Documentation

Was the documentation added/updated under docs/?

QC

Was the full pipeline run before submitting this PR using sh run.sh make build-mondo-ingest on this branch (after docker pull obolibrary/odkfull:dev), and no errors occurred?

New Packages

Were any new Python packages added?

Were any other non-Python packages added?

PR Review and Conversations Resolved

Has the PR been sufficiently reviewed by at least 1 team member of the Mondo Technical team and all threads resolved?


@souzadevinicius FYI

sabrinatoro commented 4 months ago

Thank you @joeflack4 ! That looks great! The additional column in the spreadsheet is exactly what we needed, and it will make review easier. Thank you!

I do not need this merged into main soon. So there is no urgency from my perspective.