Traceback (most recent call last):
File "/work/src/ontology/../scripts/sync_subclassof.py", line 502, in <module>
cli()
File "/work/src/ontology/../scripts/sync_subclassof.py", line 481, in cli
sync_subclassof(**d)
File "/work/src/ontology/../scripts/sync_subclassof.py", line 313, in sync_subclassof
raise ValueError(
ValueError: Detected error in consistency of sets of terms gathered from Mondo.
1. Mondo SCR ancestors: 257177
2. Mondo direct SCR relationships: 33484
3. Mondo indirect SCR relationships: 223743
Intersection (Top 5): [('MONDO:0006013', 'rdfs:subClassOf', 'MONDO:0700053'), ('MONDO:0033954', 'rdfs:subClassOf', 'MONDO:0100004'), ('MONDO:0968981', 'rdfs:subClassOf', 'MONDO:0019588'), ('MONDO:0025485', 'rdfs:subClassOf', 'MONDO:0700053'), ('MONDO:0958299', 'rdfs:subClassOf', 'MONDO:0958160')]
"1" should be same as "2" + "3", but instead it has n less rels: 50
make[1]: *** [mondo-ingest.Makefile:536: reports/doid.subclass.direct-in-mondo-only.tsv] Error 1
make[1]: Leaving directory '/work/src/ontology'
make: *** [mondo-ingest.Makefile:334: build-mondo-ingest] Error 2
Command exited with non-zero status 2
This ended with an error status: