Update all Mondo Ingest data files (12 June 2024)

[matentzn]

Overview

This PR:

• Updates all data files according to our data ingest pipeline

sh run.sh make build-mondo-ingest -B

Pre-merge checklist

Documentation

Was the documentation added/updated under docs/?

• [ ] Yes
• [X] No, updates to the docs were not necessary after careful consideration

QC

Was the full pipeline run before submitting this PR using sh run.sh make build-mondo-ingest on this branch (after docker pull obolibrary/odkfull:dev), and no errors occurred?

• [ ] Yes
• [ ] No, there are no functional (code-related) changes to the pipeline in the PR, so no re-run is necessary

New Packages

Were any new Python packages added?

• [ ] Yes, requirements.txt.full was updated and an ODK issue submitted
• [X] No

Were any other non-Python packages added?

• [ ] Yes, Dockerfile updated and an ODK issue submitted
• [X] No

PR Review and Conversations Resolved

Has the PR been sufficiently reviewed by at least 1 team member of the Mondo Technical team and all threads resolved?

• [ ] Yes

[matentzn]

@twhetzel can we merge soon?

[matentzn]

Thanks, looks ok! Reflects the new OMIM terms (additions) and the ones that were mapped (and are there for not anymore "unmapped").