experiment with making infectious disease and syndrome disjoint

nicolevasilevsky commented 4 years ago

try this after the next mondo release

nicolevasilevsky commented 3 years ago

@matentzn something we can work on together someday

nicolevasilevsky commented 2 years ago

to do: look at the unsatisfiable classes and see if there are underlying issues. We may not decide to make these disjoint but this can highlight underlying issues.

[ ] 'Bickerstaff brainstem encephalitis'
[ ] 'congenital mumps'
[ ] 'congenital varicella syndrome'
[ ] 'fetal cytomegalovirus syndrome'
[ ] 'fetal enterovirus syndrome'
[ ] 'fetal parainfluenza virus type 3 syndrome'
[ ] 'hantavirus pulmonary syndrome'
[ ] 'idiopathic acute eosinophilic pneumonia'
[ ] 'Kluver-Bucy syndrome'
[ ] 'limbic encephalitis with LGI1 antibodies'
[ ] 'ornithine translocase deficiency'
[ ] 'staphylococcal toxic-shock syndrome'
[ ] 'streptococcal toxic-shock syndrome'
[ ] 'toxic shock syndrome'
[ ] 'Wissler syndrome'
[ ] 'Zika virus congenital syndrome'

nicolevasilevsky commented 2 years ago

@sabrinatoro I'm assigning this to you. Let me know if you have any questions or would like to work on this together. We could work on it on a curation call if you like.

sabrinatoro commented 2 years ago

@nicolevasilevsky could you give me some background about this issue? Why do we want to make infectious disease and syndrome disjoint? Currently, "syndrome" is only for 'post-infectious syndrome' (ie not infectious disease), and 'post-infectious syndrome' is a child of 'post-infectious disorder'.

monarch-initiative / mondo

experiment with making infectious disease and syndrome disjoint #1221