monarch-initiative / mondo

Mondo Disease Ontology
http://obofoundry.org/ontology/mondo
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new classification/modeling for infectious diseases #2950

Closed nicolevasilevsky closed 3 years ago

nicolevasilevsky commented 3 years ago

Viral infection logical def: 'infectious disease' and ('disease has infectious agent' some Viruses)

-Primary infection (need text def) logical def: 'infectious disease' and ('disease has primary infectious agent' some Viruses) Note: create new object property: 'disease has primary infectious agent'

-Latent infection (need text def) logical def: 'infectious disease' and ('disease has latent infectious agent' some Viruses) Note: create new object property: 'disease has latent infectious agent'

viral infectious disease or sequela logical def: 'viral infectious disease' or 'post-viral disorder'

New hierarchy

viral disease or post-viral disorder -viral infectious disease or sequela --viral infectious disease ---primary viral infectious disease ----AIDS ----chickenpox ----COVID-19 ---latent viral infectious disease ----herpes zoster -----'geniculate herpes zoster' -----'ophthalmic herpes zoster' -----'zoster sine herpete' -post-viral disorder (is 'sequela of viral infectious disease' equivalent to 'post-viral disorder'? If I model the logical axiom after sequela of COVID-19, then it is inferred to be equivalent)

nicolevasilevsky commented 3 years ago

related to https://github.com/monarch-initiative/mondo/issues/3142