monarch-initiative / mondo

Mondo Disease Ontology
http://obofoundry.org/ontology/mondo
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Mass Obsoletion: focus on branch 'endocrine system disorder' (MONDO:0005151) #6651

Closed sabrinatoro closed 7 months ago

sabrinatoro commented 1 year ago

Branch: 'endocrine system disorder' (MONDO:0005151)

Terms to obsolete:

obsoletion candidate ID obsoletion candidate name
http://purl.obolibrary.org/obo/MONDO_0017961 46,XX disorder of gonadal development
http://purl.obolibrary.org/obo/MONDO_0020039 46,XX disorder of sex development induced by androgens excess
http://purl.obolibrary.org/obo/MONDO_0017963 46,XX disorder of sex development induced by endogenous maternal-derived androgen
http://purl.obolibrary.org/obo/MONDO_0017964 46,XX disorder of sex development induced by exogenous maternal-derived androgen
http://purl.obolibrary.org/obo/MONDO_0019593 46,XX disorder of sex development induced by fetal androgens excess
http://purl.obolibrary.org/obo/MONDO_0017962 46,XX disorder of sex development induced by fetoplacental androgens excess
http://purl.obolibrary.org/obo/MONDO_0019608 46,XX disorder of sex development induced by maternal-derived androgen
http://purl.obolibrary.org/obo/MONDO_0017966 46,XY disorder of gonadal development
http://purl.obolibrary.org/obo/MONDO_0019597 46,XY disorder of sex development due to isolated 17,20-lyase deficiency
http://purl.obolibrary.org/obo/MONDO_0017974 46,XY disorder of sex development induced by maternal-exposure to endocrine disruptors
http://purl.obolibrary.org/obo/MONDO_0017969 46,XY disorder of sex development of endocrine origin
http://purl.obolibrary.org/obo/MONDO_0015130 acquired chronic primary adrenal insufficiency
http://purl.obolibrary.org/obo/MONDO_0017240 acrodysostosis with multiple hormone resistance
http://purl.obolibrary.org/obo/MONDO_0018532 adenocarcinoma of liver and intrahepatic biliary tract
http://purl.obolibrary.org/obo/MONDO_0015777 adult hypothyroidism
http://purl.obolibrary.org/obo/MONDO_0019800 chronic hepatic porphyria
http://purl.obolibrary.org/obo/MONDO_0017709 disorder of lipid absorption and transport
http://purl.obolibrary.org/obo/MONDO_0017581 familial infantile gigantism
http://purl.obolibrary.org/obo/MONDO_0028618 gastroenteric neuroendocrine neoplasm
http://purl.obolibrary.org/obo/MONDO_0957024 hereditary 46,XX disorder of sex development
http://purl.obolibrary.org/obo/MONDO_0957025 hereditary 46,XY disorder of sex development
http://purl.obolibrary.org/obo/MONDO_0015509 hereditary biliary tract disease
http://purl.obolibrary.org/obo/MONDO_0015508 hereditary parenchymatous liver disease
http://purl.obolibrary.org/obo/MONDO_0019505 hypomyelination-hypogonadotropic hypogonadism-hypodontia syndrome
http://purl.obolibrary.org/obo/MONDO_0025511 inherited neuroendocrine tumor
http://purl.obolibrary.org/obo/MONDO_0018575 microcephalic primordial dwarfism-insulin resistance syndrome
http://purl.obolibrary.org/obo/MONDO_0019758 midline interhemispheric variant of holoprosencephaly
http://purl.obolibrary.org/obo/MONDO_0016721 pineal tumor of neuroepithelial tissue
http://purl.obolibrary.org/obo/MONDO_0019844 pituitary hormone deficiency secondary to storage disease
http://purl.obolibrary.org/obo/MONDO_0016409 primary congenital hypothyroidism
http://purl.obolibrary.org/obo/MONDO_0020524 primary parathyroid hyperplasia
http://purl.obolibrary.org/obo/MONDO_0034217 resistance to thyroid hormone due to a mutation in thyroid hormone receptor beta
http://purl.obolibrary.org/obo/MONDO_0016355 semilobar holoprosencephaly
http://purl.obolibrary.org/obo/MONDO_0017218 septopreoptic holoprosencephaly
http://purl.obolibrary.org/obo/MONDO_0034661 syndromic biliary atresia
http://purl.obolibrary.org/obo/MONDO_0016565 syndromic genetic obesity
http://purl.obolibrary.org/obo/MONDO_0015778 syndromic hypothyroidism
nicolevasilevsky commented 1 year ago

Reassigning @katiermullen as we discussed on the call last week. Thanks @katiermullen!

nicolevasilevsky commented 1 year ago

spreadsheet is here

katiermullen commented 1 year ago

@nicolevasilevsky @twhetzel please review and comment on 'orphaned' and 'leaves the branch' designees in the spreadsheet. Thank you!

nicolevasilevsky commented 1 year ago

Review is done! Nice job @katiermullen

@sabrinatoro do you want to take a look at my comments and make sure you agree?

katiermullen commented 1 year ago

I made some edits to this branch based on "syndromic disease" discussion #6768

sabrinatoro commented 1 year ago

I reviewed and it looks good. It is ready for PR. Thank you @katiermullen

sabrinatoro commented 11 months ago

Expert review feedback: https://docs.google.com/spreadsheets/d/1yJ08nxP3Eu59G3wwVO8KXc6gw6Mh21D2/edit#gid=547601471

TO DO:

Note: Once the to-do list is done, all terms will have been reviewed and this issue can be closed

sabrinatoro commented 7 months ago

There are some comments from the community that should be reviewed, but this is future work. This issue can be closed for now.