Mass Obsoletion: focus on branch 'reproductive system disorder' (MONDO:0005039)

[sabrinatoro]

branch 'reproductive system disorder' (MONDO:0005039)

Terms to Obsolete: obsoletion candidate ID	obsoletion candidate label
http://purl.obolibrary.org/obo/MONDO_0017961	46,XX disorder of gonadal development
http://purl.obolibrary.org/obo/MONDO_0020039	46,XX disorder of sex development induced by androgens excess
http://purl.obolibrary.org/obo/MONDO_0017963	46,XX disorder of sex development induced by endogenous maternal-derived androgen
http://purl.obolibrary.org/obo/MONDO_0017964	46,XX disorder of sex development induced by exogenous maternal-derived androgen
http://purl.obolibrary.org/obo/MONDO_0019593	46,XX disorder of sex development induced by fetal androgens excess
http://purl.obolibrary.org/obo/MONDO_0017962	46,XX disorder of sex development induced by fetoplacental androgens excess
http://purl.obolibrary.org/obo/MONDO_0019608	46,XX disorder of sex development induced by maternal-derived androgen
http://purl.obolibrary.org/obo/MONDO_0017966	46,XY disorder of gonadal development
http://purl.obolibrary.org/obo/MONDO_0019597	46,XY disorder of sex development due to isolated 17,20-lyase deficiency
http://purl.obolibrary.org/obo/MONDO_0017974	46,XY disorder of sex development induced by maternal-exposure to endocrine disruptors
http://purl.obolibrary.org/obo/MONDO_0017969	46,XY disorder of sex development of endocrine origin
http://purl.obolibrary.org/obo/MONDO_0015860	anomaly of puberty or/and menstrual cycle
http://purl.obolibrary.org/obo/MONDO_0016072	anomaly of puberty or/and menstrual cycle of genetic origin
http://purl.obolibrary.org/obo/MONDO_0015853	deficient breast volume or number
http://purl.obolibrary.org/obo/MONDO_0015852	excess breast volume or number
http://purl.obolibrary.org/obo/MONDO_0957024	hereditary 46,XX disorder of sex development
http://purl.obolibrary.org/obo/MONDO_0957025	hereditary 46,XY disorder of sex development
http://purl.obolibrary.org/obo/MONDO_0019505	hypomyelination-hypogonadotropic hypogonadism-hypodontia syndrome
http://purl.obolibrary.org/obo/MONDO_0018393	male infertility with azoospermia or oligozoospermia due to single gene mutation
http://purl.obolibrary.org/obo/MONDO_0018575	microcephalic primordial dwarfism-insulin resistance syndrome
http://purl.obolibrary.org/obo/MONDO_0017173	non-syndromic male infertility due to sperm motility disorder
http://purl.obolibrary.org/obo/MONDO_0015932	non-syndromic urogenital tract malformation of female
http://purl.obolibrary.org/obo/MONDO_0015933	non-syndromic urogenital tract malformation of male
http://purl.obolibrary.org/obo/MONDO_0015829	non-syndromic uterovaginal malformation
http://purl.obolibrary.org/obo/MONDO_0015846	syndromic uterovaginal malformation
http://purl.obolibrary.org/obo/MONDO_0015837	Unicervical bicornuate uterus
http://purl.obolibrary.org/obo/MONDO_0015828	uterovaginal malformation

[katiermullen]

Spreadsheet here

@sabrinatoro @nicolevasilevsky @twhetzel Please review "orphaned" and "leaves the branch" terms

[nicolevasilevsky]

Thanks @katiermullen! I can review this

[nicolevasilevsky]

@katiermullen this looks great. There were a few diseases that I assigned to a more specific parent. Please take a look and let me know if you disagree. Otherwise this is ready or mass obs pipeline

cc @sabrinatoro

[katiermullen]

@nicolevasilevsky I agree with your more specific parent assignments. Thank you!

[sabrinatoro]

Expert review feedback: https://docs.google.com/spreadsheets/d/1ti5UK7RTZ7Q7KY0nzQpt0iqNCevHyNx9/edit#gid=1415655236

TO DO:

• [ ] add new parents ("ROBOT add parent" Tab)
• [ ] add new comments ("ROBOT add comment" Tab) Note: Once the to-do list is done, this issue can be closed.

[sabrinatoro]

There are some comments from the community that should be reviewed, but this is future work. This issue can be closed for now.