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Mondo Disease Ontology
http://obofoundry.org/ontology/mondo
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Orphanet 98819 Familial temporal lobe epilepsy #7349

Closed kanems closed 4 months ago

kanems commented 8 months ago

Mondo term (ID and Label): MONDO:0011965 familial temporal lobe epilepsy 2

Xref that should be fixed (ID and label): Familial temporal lobe epilepsyORDO

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Other comments: This Orphanet entry maps to 2 MIM numbers, so I think it has to go up higher in this branch, but I'm not sure where. Maybe MONDO:0005115 ? But this is equivalent to the OMIM PS, which has more than 2 children terms.

Other Mondo entries to review as part of this remapping: MONDO:0100032 familial temporal lobe epilepsy syndrome (has no x-refs, but in name seems similar to Epilepsy, familial temporal lobe - PS600512 (OMIM) ? )

sabrinatoro commented 7 months ago

I agree that Orphanet:98819 is equivalent to MONDO:0005115 (also based on the definition).

@nicolevasilevsky (I think you worked on Epilepsy), do you think we should merge the following terms? 'temporal lobe epilepsy' MONDO:0005115 'familial temporal lobe epilepsy syndrome' MONDO:0100032

They both refer to "familial temporal lobe epilepsy". Thanks!

nicolevasilevsky commented 7 months ago

Hi, Yes, I did work on the epilepsy classification.

Yes, I think it makes sense to merge 'familial temporal lobe epilepsy syndrome' MONDO:0100032 with 'familial temporal lobe epilepsy syndrome' MONDO:0100032.

This term comes from the ILAE classification, but what is interesting, if you click on the genetics page that is linked to this term, it says the gene DEPDC5 is implicated but I have the impression this is a potential gene that is implicated, not necessarily the gene.

https://www.epilepsydiagnosis.org/syndrome/other-familial-temporal-lobe-genetics.html

This gene is not involved with temporal lobe epilepsy in OMIM: https://www.omim.org/entry/614191?search=DEPDC5&highlight=depdc5

The Gene Reviews page for DEPDC5 does not suggest definitive involvement:

"Familial temporal lobe epilepsy has rarely been described [Ishida et al 2013, Krenn et al 2020] and includes two subtypes.

I think this merger makes sense.

sabrinatoro commented 7 months ago

Thank you @nicolevasilevsky. I'll add this merge to our list :-)