Ingest uses skos:exactMatch instead of oboInOwl:hasExactSynonym

matentzn commented 2 years ago

Example:

OMIM:136130 a owl:Class ;
    rdfs:label "FMO1" ;
    IAO:0000142 PMID:11809920,
        PMID:1712018,
        PMID:2203193,
        PMID:8486388,
        PMID:8654418 ;
    oboInOwl:hasDbXref UMLS:C1414643 ;
    oboInOwl:hasExactSynonym "FMO1" ;
    rdfs:subClassOf SO:0000704 ;
    owl:equivalentClass NCBIGene:2326 ;
    skos:exactMatch "flavin-containing monooxygenase 1",
        "fmo, fetal liver" ;
    biolink:category biolink:Gene .

    skos:exactMatch "flavin-containing monooxygenase 1",
        "fmo, fetal liver" ;

Should be:

    oboInOwl:hasExactSynonym "flavin-containing monooxygenase 1",
        "fmo, fetal liver" ;

Make sure you import the oboInOwl namespace:

prefix oboInOwl: <http://www.geneontology.org/formats/oboInOwl#>

cc @hrshdhgd

joeflack4 commented 2 years ago

@matentzn Got it. I'm thinking this will be an easy change.

joeflack4 commented 2 years ago

Changed and did QC check. Created a new release.

monarch-initiative / omim

Ingest uses skos:exactMatch instead of oboInOwl:hasExactSynonym #41