Compute `time_of_collection` in Biosample

monarch-initiative / oncoexporter

Cancer data to GA4GH phenopacket

https://monarch-initiative.github.io/oncoexporter

MIT License

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Compute `time_of_collection` in Biosample #77

Open ielis opened 5 months ago

ielis commented 5 months ago

During parsing the CDA biosample table, CdaTableImporter should compute the time of collection in Biosample using days_to_collection (biosample table) and age_at_diagnosis (Disease, Phenopacket Schema).

The details need to be worked out.

ielis commented 5 months ago

Related to #41