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monarch-initiative / oncoexporter

A package to convert cancer data to GA4GH phenopacket
https://monarch-initiative.github.io/oncoexporter
MIT License
7 stars 1 forks source link

Improve UBERON mapping #78

Open ielis opened 10 months ago

ielis commented 10 months ago

At the moment, oncoexporter.cda.mapper.OpUberonMapper is rather simple, backed by a dictionary and a simplistic matching scheme.

The matching needs to be improved to support CDA queries other than Lung or Cervix.