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monarch-initiative / owlsim-v3

Ontology Based Profile Matching
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Create route to show all best ontology class matches between pairs of ontology terms in two ontologies #40

Closed cmungall closed 7 years ago

cmungall commented 7 years ago

we currently deposit best inter-ontology phenosim matches between ontologies here:

https://github.com/obophenotype/upheno/tree/master/mappings

the code uses owlsim2 https://github.com/obophenotype/upheno/blob/master/Makefile#L201-L214

We want to do this dynamically from the API