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monarch-initiative / phenol

phenol: Phenotype ontology library
https://phenol.readthedocs.io/en/latest/
BSD 3-Clause "New" or "Revised" License
23 stars 4 forks source link

Obsolete Terms #423

Closed iimpulse closed 12 months ago

iimpulse commented 1 year ago

https://github.com/monarch-initiative/phenol/blob/0da2c42a5c493173a03c90108560da378d89b182/phenol-core/src/main/java/org/monarchinitiative/phenol/ontology/data/MinimalOntology.java#L111

The comment instructs this returns obsolete terms. Is this true?

ielis commented 12 months ago

The documentation has been fixed to indicate that the method does not provide obsolete terms to resolve the ambiguity.