Aim 2.1.1 Create a containerized workflow for executing the k-BOOM disease harmonization algorithm.

monarch-initiative / phenomics_first_resource

Project Management repository for anything in and around the Phenomics First Resource (PFR)

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Open sagehrke opened 1 year ago

sagehrke commented 1 year ago

[ ] Integrating boomer in our general curation workflows (this needs a hackathon, but I started drafting some slides to that end
[ ] Add boomer to ODK
[ ] Implement 2 boomer-driven curation workflows (1: Integration of new mappings, 2: reviewing the consistency of old mappings, see slides above)

matentzn commented 1 year ago

Formalised the workflows for boomer
Developed an extension to OAK to support the analysis of equivalence cliques by mapping curators
Boomer is dockerised

I consider this goal mostly achieved, but I will confirm this during the RPPR finalisation

matentzn commented 11 months ago

No further updates, since the last one above.