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monarch-initiative / phenopacket-store

Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.
https://monarch-initiative.github.io/phenopacket-store/
BSD 3-Clause "New" or "Revised" License
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OFD1 notebooks #24

Closed pnrobinson closed 1 year ago

pnrobinson commented 1 year ago

We now have two notebooks that ingest this paper https://pubmed.ncbi.nlm.nih.gov/19800048/

One of the notebook is entitled PMID_11179005 but it does not ingest this data. Is it possible that something was not checked in or some other problem happened? @ielis @ldingemans ? https://pubmed.ncbi.nlm.nih.gov/11179005/

ldingemans commented 1 year ago

I think something went wrong when I saved the notebook (or in this case: I apparently didn't save the notebook?), because the resulting phenopackets look okay.

I will dig in our backups this week to see if I can recover the original notebook, and otherwise I will recreate it.

ldingemans commented 1 year ago

fixed with 53ad51d4833daee01e16c8bb5d4870b42c301a6e