A PR with updates for generating phenopacket store stats.
I added optional dependencies that we need to run the notebooks and updated the documentation to reflect this:
python3 -m pip install ppktstore[notebooks]
if you want to generate the release ZIP and run the stats notebook.
I also updated the notebooks a little. I did not, however, tweak the colors or other aspects of the plot style. I think this should be done via matplotlibrc file, along with restructuring of the repo. We can do that later, if necessary.
A PR with updates for generating phenopacket store stats.
I added optional dependencies that we need to run the notebooks and updated the documentation to reflect this:
if you want to generate the release ZIP and run the stats notebook.
I also updated the notebooks a little. I did not, however, tweak the colors or other aspects of the plot style. I think this should be done via
matplotlibrcfile, along with restructuring of the repo. We can do that later, if necessary.