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monarch-initiative / pheval

A framework for empirical evaluation of phenotype matching and prioritisation
https://monarch-initiative.github.io/pheval/
Apache License 2.0
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Only convert sample ID in the VCF in the header lines. #323

Closed yaseminbridges closed 4 months ago

yaseminbridges commented 4 months ago

At the moment, the sample ID in the VCF is replaced throughout the file, this can cause errors as if its replaced in the INFO fields and there is whitespace, the VCF format isn't valid