Full Disease ID - Githubissues

monarch-initiative / pyphetools

Python Phenopacket Tools

https://monarch-initiative.github.io/pyphetools/

MIT License

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Full Disease ID #15

Closed lnrekerle closed 1 year ago

lnrekerle commented 1 year ago

I noticed in Example1(rowwise_table)_MAPK8IP3.ipynb that the disease does not have the ID type (OMIM, MONDO, etc)

disease_id = '618443'
disease_name = 'Neurodevelopmental disorder with or without variable brain abnormalities'

encoder.set_disease(disease_id=disease_id, label=disease_name)

This is affecting my code for genophenocorr since I am using the data as sample data. Thank you!!

pnrobinson commented 1 year ago

fixed this