Add high level classification

[katiermullen]

Address #129

The inferred breed hierarchy is classifying correctly except for the South American camelid breeds - Llama breed, Alpaca breed, Vicuna breed and Guanaco breed should be children of South American camelid breed.

[sabrinatoro]

Great job @katiermullen

• please see comments in the high-level classification spreadsheet
• we need to add "vertebrate breeds" as a "has ontology root term" for the ontology (instead of "vertebrata ". We can do this together so you see what I mean
• The cat component was not refreshed, so we cannot see how the classification was updated.
• Some of the high-level classification terms should be under another high-level classification terms (eg. 'Ass breed' and 'horse breed' should be under 'equid breed'
• Note to ourselves: once we havereviewed the cat, we should update all breeds and add the "vertebrate breed" parent

[katiermullen]

@sabrinatoro thank you for your review!

• please see comments in the high-level classification spreadsheet

done! A couple of questions remain for us to address on a call.

• we need to add "vertebrate breeds" as a "has ontology root term" for the ontology (instead of "vertebrata ". We can do this together so you see what I mean

Looking forward to it.

• The cat component was not refreshed, so we cannot see how the classification was updated.

Will update and refresh.

• Some of the high-level classification terms should be under another high-level classification terms (eg. 'Ass breed' and 'horse breed' should be under 'equid breed'

Can I make the SC of the 'Ass breed' and 'Horse breed' be 'Equid breed' VBO:0400033? This way, the high level classification will be apparent in the inferred and asserted views of the ontology. Or is there another way I should address this for Equid, Bird, Poultry breed, etc?

• Note to ourselves: once we have reviewed the cat, we should update all breeds and add the "vertebrate breed" parent

can't wait!

[katiermullen]

@matentzn could you please review this PR with emphasis on the high level classification and update to the ontology root term.

@sabrinatoro has kindly offered to review the other changes that this PR encompasses.

Thank you!!!

[katiermullen]

@matentzn Thank you for your review comments and further explanations today! Much appreciated.