mooch443 / trex

TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.
https://trex.run
GNU General Public License v3.0
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pvinfo not displaying information about blobs #199

Open anpeter1 opened 1 year ago

anpeter1 commented 1 year ago

According to TRex docs, I should be able to check the blob information about a converted video with pvinfo. I am unable to get pvinfo to display the wanted information

After converting a video at the terminal, I run the following command with the following output:

pvinfo -i /vortex/schooling/TRex/scaleRN/video/pv/2023-04-22_sch001_tr001.pv [22:50:23] pv::File<V8, 24.45MB, "/vortex/schooling/TRex/scaleRN/video/pv/2023-04-22_sch001_tr001", [1836,1844], 8969 frames, no mask>

crop_offsets: [0,0,0,0] Time of recording: 'Wed Apr 26 14:53:14 2023' Length of recording: '00d:00h:05m:09s' Framerate: 28fps (34.483ms)

Metadata: {"meta_species": "rummy", "meta_age_days": -1, "meta_conditions": "scaling", "meta_misc": "school", "cam_limit_exposure": 5500, "meta_real_width": 107, "meta_source_path": "/vortex/schooling/TRex/scaleRN/video/compressed/2023-04-22_sch001_tr001.mp4", "meta_cmd": " tgrabs -i /vortex/schooling/TRex/scaleRN/video/compressed/2023-04-22_sch001_tr001.mp4 -o /vortex/schooling/TRex/scaleRN/video/pv/2023-04-22_sch001_tr001.pv -track_max_individuals 5 -meta_real_width 107 -threshold 20 -averaging_method mode -average_samples 150 -meta_conditions scaling exp -meta_species rummy nose tetra -meta_misc school ABC", "meta_build": "4ce4be1cd1679bcca4da5af8780dd86c1d31050b", "meta_conversion_time": "26-04-2023 14:53:13", "frame_rate": 29, "cam_undistort_vector": [-0.257663,-0.192336,0.002455,0.003988,0.35924], "cam_matrix": [2945.0896,0,617.255432,0,2942.825195,682.473633,0,0,1]}

I expected an output similar to the docs: image

Ubuntu 20.04.6 LTS TRex V1.1.9