fix inf for avg_exp - Githubissues

moontreegy / scseq_data_formatting

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Closed liuyifang closed 4 years ago

liuyifang commented 4 years ago

refer to issue #36 data location: /n/groups/flyrnai/yifang/Projects/With/Yue_Aram/scseq_data_formatting/processing_data/31915294_Drosophila_Gut

@moontreegy Fix inf for avg_exp issue for this particular dataset, please review it, thanks!

moontreegy commented 4 years ago

Why it has so large value? I checked one result of other datasets, the max avg_exp value is about 6000+.

liuyifang commented 4 years ago

I get the Seurat Object result from another person, it does not normalize data using the following code:

seuratObj <- NormalizeData(seuratObj)