moontreegy / scseq_data_formatting

0 stars 0 forks source link

29980650_Human_Kidney #53

Open moontreegy opened 4 years ago

moontreegy commented 4 years ago

PMID: 29980650 Species: Human Tissue: Kidney Paper title: Single-Cell Transcriptomics of a Human Kidney Allograft Biopsy Specimen Defines a Diverse Inflammatory Response Paper link: https://pubmed.ncbi.nlm.nih.gov/29980650/

Seurat object is provided.

moontreegy commented 4 years ago

@drsc-user Aram, newly add 29980650_Human_Kidney Result location: /n/groups/flyrnai/Yue/scseq_data_formatting/processing_data/29980650_Human_Kidney/results/

I generated 5 kinds of results: healthy kidney: 4259 nuclei with 6 clusters, results with prefix 'healthy' allograft kidney: 4487 cells with 16 clusters, results with prefix 'allograft' combined epithelia: 4643 cells (healthy 3532 cells, allograft 1111 cells), results with prefix 'Combined-Epithelia-...'