moontreegy / scseq_data_formatting

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32900993_Drosophila_Lymphgland #66

Open moontreegy opened 3 years ago

moontreegy commented 3 years ago

PMID: 32900993 Species: Drosophila Tissue: Lymphgland Paper title: Single-cell transcriptome maps of myeloid blood cell lineages in Drosophila Paper link: https://pubmed.ncbi.nlm.nih.gov/32900993/ GEO link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE141273 Result location: /n/groups/flyrnai/Yue/scseq_data_formatting/processing_data/32900993_Drosophila_Lymphgland/results/

Barcode2clutser info is obtained from https://github.com/sangho1130/Dmel_Dropseq/tree/master/3.Revision/updated_figures/Normal_LG/rdata

The cell numbers are updated in their provided barcode2cluster info, so it is different from paper, but the cell types are consistent. There are 2227 cells (72h), 9383 cells (96h), 7829 cells (120h), 19439 cells in total

moontreegy commented 3 years ago

@drsc-user Hi Aram,

Newly added dataset: 32900993_Drosophila_Lymphgland I generated three results corresponding to 3 time points and a merged one.

result location: /n/groups/flyrnai/Yue/scseq_data_formatting/processing_data/32900993_Drosophila_Lymphgland/results/