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moorepants / learn-multibody-dynamics

Interactive computational book on multibody dynamics
https://moorepants.github.io/learn-multibody-dynamics/
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Set software versions to match the multibody course homework system #117

Closed moorepants closed 1 year ago

moorepants commented 1 year ago

See: https://github.com/moorepants/me41055/issues/65#issuecomment-1415919359

moorepants commented 1 year ago

I loaded the conda env from the 2022 course and the HTML and PDF files built fine. This is a record of the software versions that I have in the environment:

# packages in environment at /home/moorepants/miniconda/envs/multibody-book:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       2_gnu    conda-forge
alabaster                 0.7.12                     py_0    conda-forge
alsa-lib                  1.2.6.1              h7f98852_0    conda-forge
argon2-cffi               21.3.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0           py39hb9d737c_2    conda-forge
asttokens                 2.0.5              pyhd8ed1ab_0    conda-forge
atk-1.0                   2.36.0               h3371d22_4    conda-forge
attr                      2.5.1                h166bdaf_0    conda-forge
attrs                     22.1.0             pyh71513ae_0    conda-forge
babel                     2.10.3             pyhd8ed1ab_0    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                        py_2    conda-forge
backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
beautifulsoup4            4.11.1             pyha770c72_0    conda-forge
bleach                    5.0.1              pyhd8ed1ab_0    conda-forge
brotli                    1.0.9                h166bdaf_7    conda-forge
brotli-bin                1.0.9                h166bdaf_7    conda-forge
brotlipy                  0.7.0           py39hb9d737c_1004    conda-forge
bzip2                     1.0.8                h7f98852_4    conda-forge
ca-certificates           2022.6.15            ha878542_0    conda-forge
cairo                     1.16.0            ha61ee94_1011    conda-forge
certifi                   2022.6.15        py39hf3d152e_0    conda-forge
cffi                      1.15.1           py39he91dace_0    conda-forge
charset-normalizer        2.1.0              pyhd8ed1ab_0    conda-forge
colorama                  0.4.5              pyhd8ed1ab_0    conda-forge
cryptography              37.0.4           py39hd97740a_0    conda-forge
css-html-js-minify        2.5.5            py39hf3d152e_6    conda-forge
cycler                    0.11.0             pyhd8ed1ab_0    conda-forge
dbus                      1.13.6               h5008d03_3    conda-forge
debugpy                   1.6.0            py39h5a03fae_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
docutils                  0.19             py39hf3d152e_0    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
executing                 0.9.1              pyhd8ed1ab_0    conda-forge
expat                     2.4.8                h27087fc_0    conda-forge
fftw                      3.3.10          nompi_h77c792f_102    conda-forge
flit-core                 3.7.1              pyhd8ed1ab_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 hab24e00_0    conda-forge
fontconfig                2.14.0               h8e229c2_0    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
fonttools                 4.34.4           py39hb9d737c_0    conda-forge
freetype                  2.10.4               h0708190_1    conda-forge
fribidi                   1.0.10               h36c2ea0_0    conda-forge
gdk-pixbuf                2.42.8               hff1cb4f_0    conda-forge
gettext                   0.19.8.1          h73d1719_1008    conda-forge
ghp-import                2.1.0              pyhd8ed1ab_0    conda-forge
giflib                    5.2.1                h36c2ea0_2    conda-forge
glib                      2.72.1               h6239696_0    conda-forge
glib-tools                2.72.1               h6239696_0    conda-forge
gmp                       6.2.1                h58526e2_0    conda-forge
gmpy2                     2.1.2            py39h78fa15d_0    conda-forge
graphite2                 1.3.13            h58526e2_1001    conda-forge
graphviz                  5.0.0                h5abf519_0    conda-forge
gst-plugins-base          1.20.3               hf6a322e_0    conda-forge
gstreamer                 1.20.3               hd4edc92_0    conda-forge
gtk2                      2.24.33              h90689f9_2    conda-forge
gts                       0.7.6                h64030ff_2    conda-forge
harfbuzz                  5.0.1                hf9f4e7c_0    conda-forge
icu                       70.1                 h27087fc_0    conda-forge
idna                      3.3                pyhd8ed1ab_0    conda-forge
imagesize                 1.4.1              pyhd8ed1ab_0    conda-forge
importlib-metadata        4.11.4           py39hf3d152e_0    conda-forge
importlib_resources       5.9.0              pyhd8ed1ab_0    conda-forge
ipydatawidgets            4.3.1.post1        pyhc268e32_0    conda-forge
ipykernel                 6.15.1             pyh210e3f2_0    conda-forge
ipython                   8.4.0            py39hf3d152e_0    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
ipywidgets                7.7.1              pyhd8ed1ab_0    conda-forge
jack                      1.9.18            h8c3723f_1002    conda-forge
jedi                      0.18.1           py39hf3d152e_1    conda-forge
jinja2                    3.1.2              pyhd8ed1ab_1    conda-forge
jpeg                      9e                   h166bdaf_2    conda-forge
jsonschema                4.7.2              pyhd8ed1ab_0    conda-forge
jupyter-sphinx            0.4.0              pyhd8ed1ab_0    conda-forge
jupyter_client            7.3.4              pyhd8ed1ab_0    conda-forge
jupyter_core              4.11.1           py39hf3d152e_0    conda-forge
jupyterlab_pygments       0.2.2              pyhd8ed1ab_0    conda-forge
jupyterlab_widgets        1.1.1              pyhd8ed1ab_0    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
kiwisolver                1.4.4            py39hf939315_0    conda-forge
krb5                      1.19.3               h3790be6_0    conda-forge
lcms2                     2.12                 hddcbb42_0    conda-forge
ld_impl_linux-64          2.36.1               hea4e1c9_2    conda-forge
lerc                      4.0.0                h27087fc_0    conda-forge
libblas                   3.9.0           15_linux64_openblas    conda-forge
libbrotlicommon           1.0.9                h166bdaf_7    conda-forge
libbrotlidec              1.0.9                h166bdaf_7    conda-forge
libbrotlienc              1.0.9                h166bdaf_7    conda-forge
libcap                    2.64                 ha37c62d_0    conda-forge
libcblas                  3.9.0           15_linux64_openblas    conda-forge
libclang                  14.0.6          default_h2e3cab8_0    conda-forge
libclang13                14.0.6          default_h3a83d3e_0    conda-forge
libcups                   2.3.3                hf5a7f15_1    conda-forge
libdb                     6.2.32               h9c3ff4c_0    conda-forge
libdeflate                1.12                 h166bdaf_0    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libevent                  2.1.10               h9b69904_4    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libflac                   1.3.4                h27087fc_0    conda-forge
libgcc-ng                 12.1.0              h8d9b700_16    conda-forge
libgd                     2.3.3                h18fbbfe_3    conda-forge
libgfortran-ng            12.1.0              h69a702a_16    conda-forge
libgfortran5              12.1.0              hdcd56e2_16    conda-forge
libglib                   2.72.1               h2d90d5f_0    conda-forge
libgomp                   12.1.0              h8d9b700_16    conda-forge
libiconv                  1.16                 h516909a_0    conda-forge
liblapack                 3.9.0           15_linux64_openblas    conda-forge
libllvm14                 14.0.6               he0ac6c6_0    conda-forge
libnsl                    2.0.0                h7f98852_0    conda-forge
libogg                    1.3.4                h7f98852_1    conda-forge
libopenblas               0.3.20          pthreads_h78a6416_1    conda-forge
libopus                   1.3.1                h7f98852_1    conda-forge
libpng                    1.6.37               h753d276_3    conda-forge
libpq                     14.4                 hd77ab85_0    conda-forge
librsvg                   2.54.4               h7abd40a_0    conda-forge
libsndfile                1.0.31               h9c3ff4c_1    conda-forge
libsodium                 1.0.18               h36c2ea0_1    conda-forge
libstdcxx-ng              12.1.0              ha89aaad_16    conda-forge
libtiff                   4.4.0                h0d92c0b_2    conda-forge
libtool                   2.4.6             h9c3ff4c_1008    conda-forge
libudev1                  249                  h166bdaf_4    conda-forge
libuuid                   2.32.1            h7f98852_1000    conda-forge
libvorbis                 1.3.7                h9c3ff4c_0    conda-forge
libwebp                   1.2.3                h522a892_1    conda-forge
libwebp-base              1.2.3                h166bdaf_2    conda-forge
libxcb                    1.13              h7f98852_1004    conda-forge
libxkbcommon              1.0.3                he3ba5ed_0    conda-forge
libxml2                   2.9.14               h22db469_3    conda-forge
libxslt                   1.1.35               h8affb1d_0    conda-forge
libzlib                   1.2.12               h166bdaf_2    conda-forge
livereload                2.6.3              pyh9f0ad1d_0    conda-forge
lxml                      4.9.1            py39hb9d737c_0    conda-forge
lz4-c                     1.9.3                h9c3ff4c_1    conda-forge
markupsafe                2.1.1            py39hb9d737c_1    conda-forge
matplotlib                3.5.2            py39hf3d152e_1    conda-forge
matplotlib-base           3.5.2            py39h700656a_1    conda-forge
matplotlib-inline         0.1.3              pyhd8ed1ab_0    conda-forge
metis                     5.1.0             h58526e2_1006    conda-forge
mistune                   0.8.4           py39h3811e60_1005    conda-forge
mpc                       1.2.1                h9f54685_0    conda-forge
mpfr                      4.1.0                h9202a9a_1    conda-forge
mpmath                    1.2.1              pyhd8ed1ab_0    conda-forge
munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
mysql-common              8.0.29               haf5c9bc_1    conda-forge
mysql-libs                8.0.29               h28c427c_1    conda-forge
nbclient                  0.6.6              pyhd8ed1ab_0    conda-forge
nbconvert                 6.5.0              pyhd8ed1ab_0    conda-forge
nbconvert-core            6.5.0              pyhd8ed1ab_0    conda-forge
nbconvert-pandoc          6.5.0              pyhd8ed1ab_0    conda-forge
nbformat                  5.4.0              pyhd8ed1ab_0    conda-forge
ncurses                   6.3                  h27087fc_1    conda-forge
nest-asyncio              1.5.5              pyhd8ed1ab_0    conda-forge
notebook                  6.4.12             pyha770c72_0    conda-forge
nspr                      4.32                 h9c3ff4c_1    conda-forge
nss                       3.78                 h2350873_0    conda-forge
numpy                     1.23.1           py39hba7629e_0    conda-forge
openjpeg                  2.4.0                hb52868f_1    conda-forge
openssl                   1.1.1q               h166bdaf_0    conda-forge
packaging                 21.3               pyhd8ed1ab_0    conda-forge
pandoc                    2.18                 ha770c72_0    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
pango                     1.50.8               hc4f8a73_1    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
pcre                      8.45                 h9c3ff4c_0    conda-forge
pexpect                   4.8.0              pyh9f0ad1d_2    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    9.2.0            py39hae2aec6_0    conda-forge
pip                       22.2.1             pyhd8ed1ab_0    conda-forge
pixman                    0.40.0               h36c2ea0_0    conda-forge
ply                       3.11                       py_1    conda-forge
portaudio                 19.6.0               h57a0ea0_5    conda-forge
prometheus_client         0.14.1             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.30             pyha770c72_0    conda-forge
psutil                    5.9.1            py39hb9d737c_0    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pulseaudio                14.0                 h7f54b18_8    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pygments                  2.12.0             pyhd8ed1ab_0    conda-forge
pyopenssl                 22.0.0             pyhd8ed1ab_0    conda-forge
pyparsing                 3.0.9              pyhd8ed1ab_0    conda-forge
pyqt                      5.15.7           py39h18e9c17_0    conda-forge
pyqt5-sip                 12.11.0          py39h5a03fae_0    conda-forge
pyrsistent                0.18.1           py39hb9d737c_1    conda-forge
pysocks                   1.7.1            py39hf3d152e_5    conda-forge
python                    3.9.13          h9a8a25e_0_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-fastjsonschema     2.16.1             pyhd8ed1ab_0    conda-forge
python-slugify            6.1.2              pyhd8ed1ab_0    conda-forge
python_abi                3.9                      2_cp39    conda-forge
pythreejs                 2.3.0              pyhd8ed1ab_0    conda-forge
pytz                      2022.1             pyhd8ed1ab_0    conda-forge
pyzmq                     23.2.0           py39headdf64_0    conda-forge
qt-main                   5.15.4               ha5833f6_2    conda-forge
readline                  8.1.2                h0f457ee_0    conda-forge
requests                  2.28.1             pyhd8ed1ab_0    conda-forge
scikits.odes              2.6.4            py39h660f056_1    conda-forge
scipy                     1.8.1            py39h8ba3f38_2    conda-forge
send2trash                1.8.0              pyhd8ed1ab_0    conda-forge
setuptools                63.2.0           py39hf3d152e_0    conda-forge
sip                       6.6.2            py39h5a03fae_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
slugify                   0.0.1                      py_2    conda-forge
snowballstemmer           2.2.0              pyhd8ed1ab_0    conda-forge
soupsieve                 2.3.2.post1        pyhd8ed1ab_0    conda-forge
sphinx                    5.1.1              pyh6c4a22f_0    conda-forge
sphinx-autobuild          2021.3.14          pyhd8ed1ab_0    conda-forge
sphinx-material           0.0.35             pyhd8ed1ab_0    conda-forge
sphinx-togglebutton       0.3.1              pyhd8ed1ab_0    conda-forge
sphinxcontrib-applehelp   1.0.2                      py_0    conda-forge
sphinxcontrib-devhelp     1.0.2                      py_0    conda-forge
sphinxcontrib-htmlhelp    2.0.0              pyhd8ed1ab_0    conda-forge
sphinxcontrib-jsmath      1.0.1                      py_0    conda-forge
sphinxcontrib-qthelp      1.0.3                      py_0    conda-forge
sphinxcontrib-serializinghtml 1.1.5              pyhd8ed1ab_2    conda-forge
sqlite                    3.39.2               h4ff8645_0    conda-forge
stack_data                0.3.0              pyhd8ed1ab_0    conda-forge
suitesparse               5.10.1               h9e50725_1    conda-forge
sundials                  5.8.0                h558c624_0    conda-forge
sympy                     1.10.1           py39hf3d152e_0    conda-forge
tbb                       2021.5.0             h924138e_1    conda-forge
terminado                 0.15.0           py39hf3d152e_0    conda-forge
text-unidecode            1.3                        py_0    conda-forge
tinycss2                  1.1.1              pyhd8ed1ab_0    conda-forge
tk                        8.6.12               h27826a3_0    conda-forge
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tornado                   6.2              py39hb9d737c_0    conda-forge
traitlets                 5.3.0              pyhd8ed1ab_0    conda-forge
traittypes                0.2.1              pyh9f0ad1d_2    conda-forge
tzdata                    2022a                h191b570_0    conda-forge
unicodedata2              14.0.0           py39hb9d737c_1    conda-forge
unidecode                 1.3.4              pyhd8ed1ab_0    conda-forge
urllib3                   1.26.11            pyhd8ed1ab_0    conda-forge
wcwidth                   0.2.5              pyh9f0ad1d_2    conda-forge
webencodings              0.5.1                      py_1    conda-forge
wheel                     0.37.1             pyhd8ed1ab_0    conda-forge
widgetsnbextension        3.6.1              pyha770c72_0    conda-forge
xcb-util                  0.4.0                h166bdaf_0    conda-forge
xcb-util-image            0.4.0                h166bdaf_0    conda-forge
xcb-util-keysyms          0.4.0                h166bdaf_0    conda-forge
xcb-util-renderutil       0.3.9                h166bdaf_0    conda-forge
xcb-util-wm               0.4.1                h166bdaf_0    conda-forge
xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
xorg-libice               1.0.10               h7f98852_0    conda-forge
xorg-libsm                1.2.3             hd9c2040_1000    conda-forge
xorg-libx11               1.7.2                h7f98852_0    conda-forge
xorg-libxau               1.0.9                h7f98852_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xorg-libxext              1.3.4                h7f98852_1    conda-forge
xorg-libxrender           0.9.10            h7f98852_1003    conda-forge
xorg-renderproto          0.11.1            h7f98852_1002    conda-forge
xorg-xextproto            7.3.0             h7f98852_1002    conda-forge
xorg-xproto               7.0.31            h7f98852_1007    conda-forge
xz                        5.2.5                h516909a_1    conda-forge
zeromq                    4.3.4                h9c3ff4c_1    conda-forge
zipp                      3.8.0              pyhd8ed1ab_0    conda-forge
zlib                      1.2.12               h166bdaf_2    conda-forge
zstd                      1.5.2                h8a70e8d_2    conda-forge
moorepants commented 1 year ago

I built a fresh conda env from the env file in the repo (final version from 2022).

I got these warnings:

WARNING: Cell printed to stderr:                                                                                                                                              
Animation size has reached 20999650 bytes, exceeding the limit of 20971520.0. If you're sure you want a larger animation embedded, set the animation.embed_limit rc parameter to a larger value (in MB). This and further frames will be dropped.                                                                                                           

WARNING: Cell printed to stderr:                                                                                                                                              
Animation size has reached 20977381 bytes, exceeding the limit of 20971520.0. If you're sure you want a larger animation embedded, set the animation.embed_limit rc parameter to a larger value (in MB). This and further frames will be dropped.                                                                                                           

WARNING: Cell printed to stderr:
Animation size has reached 21001148 bytes, exceeding the limit of 20971520.0. If you're sure you want a larger animation embedded, set the animation.embed_limit rc parameter to a larger value (in MB). This and further frames will be dropped.

WARNING: Cell printed to stderr:
/tmp/ipykernel_341398/3139199006.py:1: DeprecationWarning: scipy.cos is deprecated and will be removed in SciPy 2.0.0, use numpy.cos instead
  sp.cos(12.0)

WARNING: Cell printed to stderr:
/home/moorepants/miniconda/envs/multibody-book-test/lib/python3.9/site-packages/jupyter_client/session.py:719: UserWarning: Message serialization failed with:
Out of range float values are not JSON compliant
Supporting this message is deprecated in jupyter-client 7, please make sure your message is JSON-compliant
  content = self.pack(content)

WARNING: Cell printed to stderr:
/home/moorepants/miniconda/envs/multibody-book-test/lib/python3.9/site-packages/pythreejs/traits.py:203: UserWarning: 64-bit data types not supported for WebGL data, casting to 32-bit.
  warnings.warn('64-bit data types not supported for WebGL '

looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
writing output... [100%] visualization                                                                                                                                        
/home/moorepants/Manuscripts/learn-multibody-dynamics/simulation.rst:276: WARNING: external py:func reference target not found: numpy.deg2rad
/home/moorepants/Manuscripts/learn-multibody-dynamics/simulation.rst:276: WARNING: external py:func reference target not found: numpy.rad2deg

HTML built fine. Here is what was installed:

# packages in environment at /home/moorepants/miniconda/envs/multibody-book-test:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       2_gnu    conda-forge
alabaster                 0.7.13             pyhd8ed1ab_0    conda-forge
alsa-lib                  1.2.8                h166bdaf_0    conda-forge
anyio                     3.6.2              pyhd8ed1ab_0    conda-forge
argon2-cffi               21.3.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0           py39hb9d737c_3    conda-forge
asttokens                 2.2.1              pyhd8ed1ab_0    conda-forge
atk-1.0                   2.38.0               hd4edc92_1    conda-forge
attr                      2.5.1                h166bdaf_1    conda-forge
attrs                     22.2.0             pyh71513ae_0    conda-forge
babel                     2.11.0             pyhd8ed1ab_0    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                pyhd8ed1ab_3    conda-forge
backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
beautifulsoup4            4.11.2             pyha770c72_0    conda-forge
bleach                    6.0.0              pyhd8ed1ab_0    conda-forge
brotli                    1.0.9                h166bdaf_8    conda-forge
brotli-bin                1.0.9                h166bdaf_8    conda-forge
brotlipy                  0.7.0           py39hb9d737c_1005    conda-forge
bzip2                     1.0.8                h7f98852_4    conda-forge
ca-certificates           2022.12.7            ha878542_0    conda-forge
cairo                     1.16.0            ha61ee94_1014    conda-forge
certifi                   2022.12.7          pyhd8ed1ab_0    conda-forge
cffi                      1.15.1           py39he91dace_3    conda-forge
charset-normalizer        2.1.1              pyhd8ed1ab_0    conda-forge
colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
comm                      0.1.2              pyhd8ed1ab_0    conda-forge
cryptography              39.0.0           py39h079d5ae_0    conda-forge
css-html-js-minify        2.5.5            py39hf3d152e_7    conda-forge
cycler                    0.11.0             pyhd8ed1ab_0    conda-forge
dbus                      1.13.6               h5008d03_3    conda-forge
debugpy                   1.6.6            py39h227be39_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
docutils                  0.19             py39hf3d152e_1    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
executing                 1.2.0              pyhd8ed1ab_0    conda-forge
expat                     2.5.0                h27087fc_0    conda-forge
fftw                      3.3.10          nompi_hf0379b8_106    conda-forge
flit-core                 3.8.0              pyhd8ed1ab_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 hab24e00_0    conda-forge
fontconfig                2.14.2               h14ed4e7_0    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
fonttools                 4.38.0           py39hb9d737c_1    conda-forge
freetype                  2.12.1               hca18f0e_1    conda-forge
fribidi                   1.0.10               h36c2ea0_0    conda-forge
gdk-pixbuf                2.42.8               hff1cb4f_1    conda-forge
gettext                   0.21.1               h27087fc_0    conda-forge
ghostscript               9.54.0               h27087fc_2    conda-forge
ghp-import                2.1.0              pyhd8ed1ab_0    conda-forge
giflib                    5.2.1                h36c2ea0_2    conda-forge
glib                      2.74.1               h6239696_1    conda-forge
glib-tools                2.74.1               h6239696_1    conda-forge
gmp                       6.2.1                h58526e2_0    conda-forge
gmpy2                     2.1.2            py39h376b7d2_1    conda-forge
graphite2                 1.3.13            h58526e2_1001    conda-forge
graphviz                  5.0.0                h5abf519_0    conda-forge
gst-plugins-base          1.21.3               h4243ec0_1    conda-forge
gstreamer                 1.21.3               h25f0c4b_1    conda-forge
gstreamer-orc             0.4.33               h166bdaf_0    conda-forge
gtk2                      2.24.33              h90689f9_2    conda-forge
gts                       0.7.6                h64030ff_2    conda-forge
harfbuzz                  6.0.0                h8e241bc_0    conda-forge
icu                       70.1                 h27087fc_0    conda-forge
idna                      3.4                pyhd8ed1ab_0    conda-forge
imagemagick               7.1.0_46        pl5321hae1b4c2_0    conda-forge
imagesize                 1.4.1              pyhd8ed1ab_0    conda-forge
importlib-metadata        6.0.0              pyha770c72_0    conda-forge
importlib_metadata        6.0.0                hd8ed1ab_0    conda-forge
importlib_resources       5.10.2             pyhd8ed1ab_0    conda-forge
ipydatawidgets            4.3.2              pyhc268e32_0    conda-forge
ipykernel                 6.21.1             pyh210e3f2_0    conda-forge
ipython                   8.9.0              pyh41d4057_0    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
ipywidgets                7.6.5              pyhd8ed1ab_0    conda-forge
jack                      1.9.22               h11f4161_0    conda-forge
jbig                      2.1               h7f98852_2003    conda-forge
jedi                      0.18.2             pyhd8ed1ab_0    conda-forge
jinja2                    3.1.2              pyhd8ed1ab_1    conda-forge
jpeg                      9e                   h166bdaf_2    conda-forge
jsonschema                4.17.3             pyhd8ed1ab_0    conda-forge
jupyter-sphinx            0.4.0              pyhd8ed1ab_0    conda-forge
jupyter_client            8.0.2              pyhd8ed1ab_0    conda-forge
jupyter_core              5.2.0            py39hf3d152e_0    conda-forge
jupyter_events            0.6.3              pyhd8ed1ab_0    conda-forge
jupyter_server            2.2.1              pyhd8ed1ab_0    conda-forge
jupyter_server_terminals  0.4.4              pyhd8ed1ab_1    conda-forge
jupyterlab_pygments       0.2.2              pyhd8ed1ab_0    conda-forge
jupyterlab_widgets        3.0.5              pyhd8ed1ab_0    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
kiwisolver                1.4.4            py39hf939315_1    conda-forge
krb5                      1.20.1               h81ceb04_0    conda-forge
lame                      3.100             h166bdaf_1003    conda-forge
lcms2                     2.14                 h6ed2654_0    conda-forge
ld_impl_linux-64          2.40                 h41732ed_0    conda-forge
lerc                      4.0.0                h27087fc_0    conda-forge
libblas                   3.9.0           16_linux64_openblas    conda-forge
libbrotlicommon           1.0.9                h166bdaf_8    conda-forge
libbrotlidec              1.0.9                h166bdaf_8    conda-forge
libbrotlienc              1.0.9                h166bdaf_8    conda-forge
libcap                    2.66                 ha37c62d_0    conda-forge
libcblas                  3.9.0           16_linux64_openblas    conda-forge
libclang                  15.0.7          default_had23c3d_0    conda-forge
libclang13                15.0.7          default_h3e3d535_0    conda-forge
libcups                   2.3.3                h36d4200_3    conda-forge
libdb                     6.2.32               h9c3ff4c_0    conda-forge
libdeflate                1.14                 h166bdaf_0    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libevent                  2.1.10               h28343ad_4    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libflac                   1.4.2                h27087fc_0    conda-forge
libgcc-ng                 12.2.0              h65d4601_19    conda-forge
libgcrypt                 1.10.1               h166bdaf_0    conda-forge
libgd                     2.3.3                h18fbbfe_3    conda-forge
libgfortran-ng            12.2.0              h69a702a_19    conda-forge
libgfortran5              12.2.0              h337968e_19    conda-forge
libglib                   2.74.1               h606061b_1    conda-forge
libgomp                   12.2.0              h65d4601_19    conda-forge
libgpg-error              1.46                 h620e276_0    conda-forge
libhwloc                  2.8.0                h32351e8_1    conda-forge
libiconv                  1.17                 h166bdaf_0    conda-forge
liblapack                 3.9.0           16_linux64_openblas    conda-forge
libllvm15                 15.0.7               hadd5161_0    conda-forge
libnsl                    2.0.0                h7f98852_0    conda-forge
libogg                    1.3.4                h7f98852_1    conda-forge
libopenblas               0.3.21          pthreads_h78a6416_3    conda-forge
libopus                   1.3.1                h7f98852_1    conda-forge
libpng                    1.6.39               h753d276_0    conda-forge
libpq                     15.1                 hb675445_3    conda-forge
librsvg                   2.54.4               h7abd40a_0    conda-forge
libsndfile                1.2.0                hb75c966_0    conda-forge
libsodium                 1.0.18               h36c2ea0_1    conda-forge
libsqlite                 3.40.0               h753d276_0    conda-forge
libstdcxx-ng              12.2.0              h46fd767_19    conda-forge
libsystemd0               252                  h2a991cd_0    conda-forge
libtiff                   4.4.0                h82bc61c_5    conda-forge
libtool                   2.4.7                h27087fc_0    conda-forge
libudev1                  252                  h166bdaf_0    conda-forge
libuuid                   2.32.1            h7f98852_1000    conda-forge
libvorbis                 1.3.7                h9c3ff4c_0    conda-forge
libwebp                   1.2.4                h522a892_0    conda-forge
libwebp-base              1.2.4                h166bdaf_0    conda-forge
libxcb                    1.13              h7f98852_1004    conda-forge
libxkbcommon              1.0.3                he3ba5ed_0    conda-forge
libxml2                   2.10.3               h7463322_0    conda-forge
libxslt                   1.1.37               h873f0b0_0    conda-forge
libzlib                   1.2.13               h166bdaf_4    conda-forge
livereload                2.6.3              pyh9f0ad1d_0    conda-forge
lxml                      4.9.2            py39h14694de_0    conda-forge
lz4-c                     1.9.4                hcb278e6_0    conda-forge
markupsafe                2.1.2            py39h72bdee0_0    conda-forge
matplotlib                3.5.2            py39hf3d152e_1    conda-forge
matplotlib-base           3.5.2            py39h700656a_1    conda-forge
matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
metis                     5.1.0             h58526e2_1006    conda-forge
mistune                   2.0.4              pyhd8ed1ab_0    conda-forge
mpc                       1.3.1                hfe3b2da_0    conda-forge
mpfr                      4.1.0                h9202a9a_1    conda-forge
mpg123                    1.31.2               hcb278e6_0    conda-forge
mpmath                    1.2.1              pyhd8ed1ab_0    conda-forge
munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
mysql-common              8.0.32               ha901b37_0    conda-forge
mysql-libs                8.0.32               hd7da12d_0    conda-forge
nbclassic                 0.5.1              pyhd8ed1ab_0    conda-forge
nbclient                  0.7.2              pyhd8ed1ab_0    conda-forge
nbconvert                 7.2.9              pyhd8ed1ab_0    conda-forge
nbconvert-core            7.2.9              pyhd8ed1ab_0    conda-forge
nbconvert-pandoc          7.2.9              pyhd8ed1ab_0    conda-forge
nbformat                  5.7.3              pyhd8ed1ab_0    conda-forge
ncurses                   6.3                  h27087fc_1    conda-forge
nest-asyncio              1.5.6              pyhd8ed1ab_0    conda-forge
notebook                  6.5.2              pyha770c72_1    conda-forge
notebook-shim             0.2.2              pyhd8ed1ab_0    conda-forge
nspr                      4.35                 h27087fc_0    conda-forge
nss                       3.82                 he02c5a1_0    conda-forge
numpy                     1.23.1           py39hba7629e_0    conda-forge
openjpeg                  2.5.0                h7d73246_1    conda-forge
openssl                   3.0.7                h0b41bf4_2    conda-forge
packaging                 23.0               pyhd8ed1ab_0    conda-forge
pandoc                    2.19.2               h32600fe_1    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
pango                     1.50.12              hd33c08f_1    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
pcre2                     10.40                hc3806b6_0    conda-forge
perl                      5.32.1          2_h7f98852_perl5    conda-forge
pexpect                   4.8.0              pyh1a96a4e_2    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    9.2.0            py39hf3a2cdf_3    conda-forge
pip                       23.0               pyhd8ed1ab_0    conda-forge
pixman                    0.40.0               h36c2ea0_0    conda-forge
pkg-config                0.29.2            h36c2ea0_1008    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_0    conda-forge
platformdirs              2.6.2              pyhd8ed1ab_0    conda-forge
ply                       3.11                       py_1    conda-forge
prometheus_client         0.16.0             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.36             pyha770c72_0    conda-forge
psutil                    5.9.4            py39hb9d737c_0    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pulseaudio                16.1                 ha8d29e2_1    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pygments                  2.14.0             pyhd8ed1ab_0    conda-forge
pyopenssl                 23.0.0             pyhd8ed1ab_0    conda-forge
pyparsing                 3.0.9              pyhd8ed1ab_0    conda-forge
pyqt                      5.15.7           py39h5c7b992_3    conda-forge
pyqt5-sip                 12.11.0          py39h227be39_3    conda-forge
pyrsistent                0.19.3           py39h72bdee0_0    conda-forge
pysocks                   1.7.1              pyha2e5f31_6    conda-forge
python                    3.9.16          h2782a2a_0_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-fastjsonschema     2.16.2             pyhd8ed1ab_0    conda-forge
python-json-logger        2.0.4              pyhd8ed1ab_0    conda-forge
python-slugify            8.0.0              pyhd8ed1ab_0    conda-forge
python_abi                3.9                      3_cp39    conda-forge
pythreejs                 2.3.0              pyhd8ed1ab_0    conda-forge
pytz                      2022.7.1           pyhd8ed1ab_0    conda-forge
pyyaml                    6.0              py39hb9d737c_5    conda-forge
pyzmq                     25.0.0           py39h0be026e_0    conda-forge
qt-main                   5.15.6               h602db52_6    conda-forge
readline                  8.1.2                h0f457ee_0    conda-forge
requests                  2.28.2             pyhd8ed1ab_0    conda-forge
rfc3339-validator         0.1.4              pyhd8ed1ab_0    conda-forge
rfc3986-validator         0.1.1              pyh9f0ad1d_0    conda-forge
scikits.odes              2.6.4            py39h660f056_1    conda-forge
scipy                     1.8.1            py39hddc5342_3    conda-forge
send2trash                1.8.0              pyhd8ed1ab_0    conda-forge
setuptools                67.1.0             pyhd8ed1ab_0    conda-forge
sip                       6.7.6            py39h227be39_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
slugify                   0.0.1                      py_2    conda-forge
sniffio                   1.3.0              pyhd8ed1ab_0    conda-forge
snowballstemmer           2.2.0              pyhd8ed1ab_0    conda-forge
soupsieve                 2.3.2.post1        pyhd8ed1ab_0    conda-forge
sphinx                    5.1.1              pyhd8ed1ab_1    conda-forge
sphinx-autobuild          2021.3.14          pyhd8ed1ab_0    conda-forge
sphinx-material           0.0.35             pyhd8ed1ab_0    conda-forge
sphinx-togglebutton       0.3.1              pyhd8ed1ab_0    conda-forge
sphinxcontrib-applehelp   1.0.4              pyhd8ed1ab_0    conda-forge
sphinxcontrib-devhelp     1.0.2                      py_0    conda-forge
sphinxcontrib-htmlhelp    2.0.1              pyhd8ed1ab_0    conda-forge
sphinxcontrib-jsmath      1.0.1                      py_0    conda-forge
sphinxcontrib-qthelp      1.0.3                      py_0    conda-forge
sphinxcontrib-serializinghtml 1.1.5              pyhd8ed1ab_2    conda-forge
stack_data                0.6.2              pyhd8ed1ab_0    conda-forge
suitesparse               5.10.1               h9e50725_1    conda-forge
sundials                  5.8.0                h558c624_0    conda-forge
sympy                     1.10.1           py39hf3d152e_1    conda-forge
tbb                       2021.7.0             h924138e_1    conda-forge
terminado                 0.17.1             pyh41d4057_0    conda-forge
text-unidecode            1.3                        py_0    conda-forge
tinycss2                  1.2.1              pyhd8ed1ab_0    conda-forge
tk                        8.6.12               h27826a3_0    conda-forge
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tornado                   6.2              py39hb9d737c_1    conda-forge
traitlets                 5.9.0              pyhd8ed1ab_0    conda-forge
traittypes                0.2.1              pyh9f0ad1d_2    conda-forge
typing-extensions         4.4.0                hd8ed1ab_0    conda-forge
typing_extensions         4.4.0              pyha770c72_0    conda-forge
tzdata                    2022g                h191b570_0    conda-forge
unicodedata2              15.0.0           py39hb9d737c_0    conda-forge
unidecode                 1.3.6              pyhd8ed1ab_0    conda-forge
urllib3                   1.26.14            pyhd8ed1ab_0    conda-forge
wcwidth                   0.2.6              pyhd8ed1ab_0    conda-forge
webencodings              0.5.1                      py_1    conda-forge
websocket-client          1.5.1              pyhd8ed1ab_0    conda-forge
wheel                     0.38.4             pyhd8ed1ab_0    conda-forge
widgetsnbextension        3.5.2            py39hf3d152e_1    conda-forge
xcb-util                  0.4.0                h166bdaf_0    conda-forge
xcb-util-image            0.4.0                h166bdaf_0    conda-forge
xcb-util-keysyms          0.4.0                h166bdaf_0    conda-forge
xcb-util-renderutil       0.3.9                h166bdaf_0    conda-forge
xcb-util-wm               0.4.1                h166bdaf_0    conda-forge
xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
xorg-libice               1.0.10               h7f98852_0    conda-forge
xorg-libsm                1.2.3             hd9c2040_1000    conda-forge
xorg-libx11               1.7.2                h7f98852_0    conda-forge
xorg-libxau               1.0.9                h7f98852_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xorg-libxext              1.3.4                h7f98852_1    conda-forge
xorg-libxrender           0.9.10            h7f98852_1003    conda-forge
xorg-libxt                1.2.1                h7f98852_2    conda-forge
xorg-renderproto          0.11.1            h7f98852_1002    conda-forge
xorg-xextproto            7.3.0             h7f98852_1002    conda-forge
xorg-xproto               7.0.31            h7f98852_1007    conda-forge
xz                        5.2.6                h166bdaf_0    conda-forge
yaml                      0.2.5                h7f98852_2    conda-forge
zeromq                    4.3.4                h9c3ff4c_1    conda-forge
zipp                      3.12.0             pyhd8ed1ab_0    conda-forge
zlib                      1.2.13               h166bdaf_4    conda-forge
zstd                      1.5.2                h3eb15da_6    conda-forge
moorepants commented 1 year ago

I've made the software versions in this repo (mostly) match those that are in our Vocareum setup. I've allowed some patch point releases to be higher and have 2.6.5 of scikits.odes.