search

moosa-r / rbioapi

rbioapi: User-Friendly R Interface to Biologic Web Services' API
https://rbioapi.moosa-r.com/
GNU General Public License v3.0
17 stars 1 forks source link

The server returned HTTP Status '405' #11

Closed marikopal closed 1 year ago

marikopal commented 1 year ago

Hi,

Thanks for the great API, it is extremely useful for my research.

I am trying to run some miRNA enrichment with the following code:

rba_mieaa_enrich(test_set =deg_up,
                             mirna_type = "mature",
                             test_type = "ORA",
                             species = "hsa")

But for the past few days it just gives back an error:

 -- Step 1/3: Submitting Enrichment analysis request:
Submitting ORA enrichment request for 1 miRNA IDs of species Homo sapiens to miEAA servers.
Error: The server returned HTTP Status '405' (Redirection: Method Not Allowed).

I tried to update rbioapi and also restrict the enrichment to certain categories, but all the same. I would greatly appreciate some help to make it work again.

Best regards, Mariko

moosa-r commented 1 year ago

Dear Mariko, Thank you for reporting this issue.

This is because MiEAA changed their API root address a few weeks ago. I made a minor fix to reflect this change. But I haven't submitted the latest version to CRAN yet, since I'm waiting for some changes to accumulate.

Meanwhile, please install the latest -developmental- version from the GitHub repository:

install.packages("remotes")
remotes::install_github("moosa-r/rbioapi")

Kind regards, Moosa