The way the cbio_create is currently working it cannot accept user-provided metadata or maf data. It reads the ssm from flatfile, so when the new samples are missing from merge there is no way for them to be included in the cBioPortal instance.
We can add arguments to allow for the user-specified metadata and user-specified maf
Kdreval
commented
8 months ago
The way the
cbio_createis currently working it cannot accept user-provided metadata or maf data. It reads the ssm from flatfile, so when the new samples are missing from merge there is no way for them to be included in the cBioPortal instance. We can add arguments to allow for the user-specified metadata and user-specified maf