The function cbio_study_check() does not respect the seq_type argument. This is important because for capture samples no fusions are generated, but this function expects them to be present. This results in an error during study check for capture samples
The function
cbio_study_check()
does not respect the seq_type argument. This is important because for capture samples no fusions are generated, but this function expects them to be present. This results in an error during study check for capture samples