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morinlab / GAMBLR.results

A collection of functions to access results of the Genomic Analysis of Mature B-cell Lymphomas
MIT License
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Break stuff #44

Closed Kdreval closed 7 months ago

Kdreval commented 7 months ago

Please send help: this worked yesterday but fails now.


+                                these_samples_metadata = MCL_meta, 
+                                maf_data=maf.hg38, 
+                                projection="hg38", 
+                                metadataColumns = "cohort")
Error in `dplyr::bind_rows()`:
! Argument 1 must be a data frame or a named atomic vector.
Run `rlang::last_trace()` to see where the error occurred.
Warning messages:
1: Unknown or uninitialised column: `this_metadata`. 
2: Unknown or uninitialised column: `these_samples`. 
3: In parallel::mclapply(names(regions), function(x) { :
  all scheduled cores encountered errors in user code```

[Slack Message](https://morinlabsfu.slack.com/archives/C0224H120CU/p1706832876574309?thread_ts=1706832876.574309&cid=C0224H120CU)
Kdreval commented 7 months ago

Completed in #45