morinlab / GAMBLR.results

A collection of functions to access results of the Genomic Analysis of Mature B-cell Lymphomas
MIT License
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restore original functionality to this repository #46

Closed rdmorin closed 7 months ago

rdmorin commented 7 months ago

This PR restores get_ashm_count_matrix to GAMBLR.results. Having this function in both repositories mirrors the structure of the other functions shared with GAMBLR.data. I can confirm it uses the non-bundled data when this function is present in GAMBLR.results whereas when it's only in GAMBLR.data the bundled data are always used. I'm not certain this won't affect the GAMBLR.data function but, at worst, this just restores our original functionality and breaks the new functionality the move to GAMBLR.data was intending to add.