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morinlab / GAMBLR.viz

Collection of functions to make plots for Genomic Analysis of Mature B-cell Lymphomas in R
https://morinlab.github.io/GAMBLR.viz/
MIT License
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Optionally use raw SVs in prettyRainfallPlot #16

Closed Kdreval closed 6 months ago

Kdreval commented 8 months ago

The current implementation of prettyRainfallPlot uses annotated SVs for labelling. This should become optional and user-configurable, so user can look at raw (not annotated) SVs.

When working on this update, the sv_data also needs to be optionally passed as argument to allow for visualization of user-provided data

Kdreval commented 6 months ago

@mattssca just checking in how this is going, I think you were having some updates on this?

Kdreval commented 6 months ago

This issue is solved in the PR #30