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morinlab / GAMBLR.viz

Collection of functions to make plots for Genomic Analysis of Mature B-cell Lymphomas in R
https://morinlab.github.io/GAMBLR.viz/
MIT License
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Plotting functions should work without GSC access. #3

Closed mattssca closed 9 months ago

mattssca commented 11 months ago

GAMBLR.viz functions that are currently relying on core GAMBLR functions (GSC access) to retrieve data if MAF/SEG/BEDPE data is not provided need to be updated so that such functions can work out-of-the-box in this package. without any dependencies on GSC-access-dictated GAMBLR functions.

mattssca commented 9 months ago

This issue was resolved by the introduction of GAMBLR.data versions of familiar get_* functions, using the bundled data (no GSC access required).