It looks like the only way the get_cn_segments function works is when the database is used. The from_flatfile option is available but when I try supplying it I get an error:
my_segments = get_cn_segments(region="chr8:128,723,128-128,774,067",from_flatfile=TRUE)
Error in rbind(all_segs_matched, all_segs_unmatched) :
object 'all_segs_matched' not found
It looks like the only way the get_cn_segments function works is when the database is used. The from_flatfile option is available but when I try supplying it I get an error: