morinlab / GAMBLR

Set of standardized functions to operate with genomic data
https://morinlab.github.io/GAMBLR/
MIT License
3 stars 2 forks source link

Remote support for get_sample_cn_segments is broken #159

Closed mattssca closed 1 year ago

mattssca commented 1 year ago

There's a bug in this function that forces the function to use the path to the remote file instead of the local one.

full_cnv_path = paste0(config::get("project_base", config = "default"), cnv_path)

Getting rid of config=default seems to work, but testing has to be made to ensure it does not break anything else.