This small patch names the arguments in the call to get_ssm_by_sample in get_ssm_by_samples. Previously the flavour argument was in the augmented position and so logical tests in get_ssm_by_sample were erroring out.
I see this PR is affected by the ongoing whitespace issue and many of these changes have to do only with RStudio trimming the whitespace. The relevant lines are 144-152.
This small patch names the arguments in the call to
get_ssm_by_sampleinget_ssm_by_samples. Previously theflavourargument was in theaugmentedposition and so logical tests inget_ssm_by_samplewere erroring out.I see this PR is affected by the ongoing whitespace issue and many of these changes have to do only with RStudio trimming the whitespace. The relevant lines are 144-152.