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morinlab
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guidelines
A collection of curated guidelines to enable reproducibility in computational biology
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Consistency checks
#21
BrunoGrandePhD
opened
8 years ago
0
Set the seed whenever you rely on a random number generator
#20
BrunoGrandePhD
opened
8 years ago
0
Logging
#19
BrunoGrandePhD
opened
8 years ago
0
Store commands in scripts
#18
BrunoGrandePhD
opened
8 years ago
0
Format conventions
#17
BrunoGrandePhD
opened
8 years ago
0
Version control
#16
BrunoGrandePhD
opened
8 years ago
0
Backups
#15
BrunoGrandePhD
opened
8 years ago
0
Resources
#14
BrunoGrandePhD
opened
8 years ago
1
Caution against over-reproducibility
#13
BrunoGrandePhD
opened
8 years ago
0
READMEs
#12
BrunoGrandePhD
opened
8 years ago
0
Familiarize yourself with programs you're using
#11
BrunoGrandePhD
opened
8 years ago
0
Testing
#10
BrunoGrandePhD
opened
8 years ago
0
Modular code
#9
BrunoGrandePhD
opened
8 years ago
1
Makefiles
#8
BrunoGrandePhD
opened
8 years ago
1
Software versions
#7
BrunoGrandePhD
closed
8 years ago
0
Software versions
#6
BrunoGrandePhD
opened
8 years ago
0
Project structure
#5
BrunoGrandePhD
opened
8 years ago
1
Make data and reference read-only
#4
BrunoGrandePhD
opened
8 years ago
0
Choose appropriate license for lab software
#3
BrunoGrandePhD
opened
8 years ago
0
Parameterize any arbitrarily chosen number
#2
BrunoGrandePhD
opened
8 years ago
0
Template for new guidelines
#1
BrunoGrandePhD
closed
8 years ago
0