Closed dfornika closed 10 years ago
Two scripts (bwa_alignment_makefile and list_alignment_outputs) are used together to align full directories of fastq files with bwa.
bwa_alignment_makefile
list_alignment_outputs
The script merge_htseq_tables.py is used to merge the outputs of multiple htseq-count runs, for analysis with DESeq.
merge_htseq_tables.py
htseq-count
Two scripts (
bwa_alignment_makefileandlist_alignment_outputs) are used together to align full directories of fastq files with bwa.The script
merge_htseq_tables.pyis used to merge the outputs of multiplehtseq-countruns, for analysis with DESeq.