*** [all] Error 2 when trying to download Morpheus to Macbook Air

[lllllin001]

Hi all, I am trying to download Morpheus to a Mac, following the instruction from this page: https://morpheus.gitlab.io/faq/installation/macos/ I think successfully installed Homebrew and Morpheus Tap. However, every time I reached this step "brew install morpheus", it shows this message:

==> Fetching morpheus-lab/morpheus/morpheus
==> Downloading https://gitlab.com/morpheus.lab/morpheus/-/archive/v2.3.3/morphe
Already downloaded: /Users/lin/Library/Caches/Homebrew/downloads/ba54572de977d5dcf104366c0d79b878b093ca8afc8684b6d818c60ce0e18c5c--morpheus-v2.3.3.tar.gz
==> Installing morpheus from morpheus-lab/morpheus
==> cmake . -DMORPHEUS_RELEASE_BUNDLE=ON
==> make install
Last 15 lines from /Users/lin/Library/Logs/Homebrew/morpheus/02.make:
-- Installing: /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/include/sbml/math/MathML.h
-- Installing: /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/lib/libsbml-static.a
-- Installing: /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/lib/cmake/sbml-static-config.cmake
-- Installing: /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/lib/cmake/sbml-static-config-release.cmake
-- Installing: /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/lib/cmake/sbml-static-config-version.cmake
cd /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/libSBML/build && /opt/homebrew/Cellar/cmake/3.26.0/bin/cmake -E touch /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-install
[ 44%] No test step for 'libSBML'
cd /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/libSBML/build && /opt/homebrew/Cellar/cmake/3.26.0/bin/cmake -E echo_append
cd /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/libSBML/build && /opt/homebrew/Cellar/cmake/3.26.0/bin/cmake -E touch /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-test
[ 44%] Completed 'libSBML'
cd /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.0/bin/cmake -E make_directory /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/libSBML/CMakeFiles
cd /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.0/bin/cmake -E touch /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/libSBML/CMakeFiles/libSBML-complete
cd /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.0/bin/cmake -E touch /tmp/morpheus-20230317-35785-176of33/morpheus-v2.3.3/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-done
[ 44%] Built target libSBML
make: *** [all] Error 2

If reporting this issue please do so at (not Homebrew/brew or Homebrew/homebrew-core):
  https://github.com/morpheus-lab/homebrew-morpheus/issues

And then I tried to launch Morpheus with this line: morpheus-gui

It says: zsh: command not found: morpheus-gui

I am a new member in the github, and I actually create the account for this issue. I have no prior experience in coding, but just want to download Morpheus for research purposes. So I really really hope if people could give me some clues about how I should fix this issue.

Many thanks in advance.

[jdieg0]

Hi @lllllin001,

you've indeed installed the Morpheus tap. So this looks good. 👍

Could you please run brew install morpheus again and after failure post the output of cat /Users/lin/Library/Logs/Homebrew/morpheus/02.make or attach that 02.make file by dragging and dropping it in the comment editor. Homebrew only printed the last 15 lines of the file and it seems that the details of the error are before that shown part.

Also please run brew config and brew doctor and paste the output here (for better redability you can put it between backticks (``) or use the „Add code“ (<>) button here in the GitHub editor). Maybe we can find a clue there.

Best regards, Diego

[lllllin001]

Dear Diego,

Thank you so much for helping.

This is the output after I ran brew install morpheus:

 Fetching morpheus-lab/morpheus/morpheus
==> Downloading https://gitlab.com/morpheus.lab/morpheus/-/archive/v2.3.3/morphe
Already downloaded: /Users/lin/Library/Caches/Homebrew/downloads/ba54572de977d5dcf104366c0d79b878b093ca8afc8684b6d818c60ce0e18c5c--morpheus-v2.3.3.tar.gz
Error: morpheus: SHA256 mismatch
Expected: 3ec01bd841a39fda3e9a3d04e672a65847ebe9ded212715d50604faafac05302
  Actual: b3e814a4b47dec1fb132701fa40a13708dc30f7027812dc35bd7fa90e59460cf
    File: /Users/lin/Library/Caches/Homebrew/downloads/ba54572de977d5dcf104366c0d79b878b093ca8afc8684b6d818c60ce0e18c5c--morpheus-v2.3.3.tar.gz
To retry an incomplete download, remove the file above.
(base) lin@Lins-Air ~ % 

This is the output after I ran brew config:

(base) lin@Lins-Air ~ % brew config
HOMEBREW_VERSION: 4.0.10
ORIGIN: https://github.com/Homebrew/brew
HEAD: cf6614b50eac1c9f4bf386dc6989f0d443148df8
Last commit: 9 hours ago
Core tap JSON: 27 Mar 23:06 UTC
HOMEBREW_PREFIX: /opt/homebrew
HOMEBREW_CASK_OPTS: []
HOMEBREW_MAKE_JOBS: 8
Homebrew Ruby: 2.6.8 => /opt/homebrew/Library/Homebrew/vendor/portable-ruby/2.6.8_1/bin/ruby
CPU: octa-core 64-bit arm_firestorm_icestorm
Clang: 13.0.0 build 1300
Git: 2.32.0 => /Library/Developer/CommandLineTools/usr/bin/git
Curl: 7.64.1 => /usr/bin/curl
macOS: 11.5.2-arm64
CLT: 13.2.0.0.1.1637719136
Xcode: N/A
Rosetta 2: false
(base) lin@Lins-Air ~ % 

This is output after running brew doctor:

(base) lin@Lins-Air ~ % brew doctor
Please note that these warnings are just used to help the Homebrew maintainers
with debugging if you file an issue. If everything you use Homebrew for is
working fine: please don't worry or file an issue; just ignore this. Thanks!

Warning: Unbrewed dylibs were found in /usr/local/lib.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae, and may need to be deleted.

Unexpected dylibs:
  /usr/local/lib/libtcl8.6.dylib
  /usr/local/lib/libtk8.6.dylib

Warning: Unbrewed header files were found in /usr/local/include.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae, and may need to be deleted.

Unexpected header files:
  /usr/local/include/fakemysql.h
  /usr/local/include/fakepq.h
  /usr/local/include/fakesql.h
  /usr/local/include/itcl.h
  /usr/local/include/itcl2TclOO.h
  /usr/local/include/itclDecls.h
  /usr/local/include/itclInt.h
  /usr/local/include/itclIntDecls.h
  /usr/local/include/itclMigrate2TclCore.h
  /usr/local/include/itclTclIntStubsFcn.h
  /usr/local/include/mysqlStubs.h
  /usr/local/include/odbcStubs.h
  /usr/local/include/pqStubs.h
  /usr/local/include/tcl.h
  /usr/local/include/tclDecls.h
  /usr/local/include/tclOO.h
  /usr/local/include/tclOODecls.h
  /usr/local/include/tclPlatDecls.h
  /usr/local/include/tclThread.h
  /usr/local/include/tclTomMath.h
  /usr/local/include/tclTomMathDecls.h
  /usr/local/include/tdbc.h
  /usr/local/include/tdbcDecls.h
  /usr/local/include/tdbcInt.h
  /usr/local/include/tk.h
  /usr/local/include/tkDecls.h
  /usr/local/include/tkPlatDecls.h

Warning: Unbrewed '.pc' files were found in /usr/local/lib/pkgconfig.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae, and may need to be deleted.

Unexpected '.pc' files:
  /usr/local/lib/pkgconfig/tcl.pc
  /usr/local/lib/pkgconfig/tk.pc

Warning: Unbrewed static libraries were found in /usr/local/lib.
If you didn't put them there on purpose they could cause problems when
building Homebrew formulae, and may need to be deleted.

Unexpected static libraries:
  /usr/local/lib/libtclstub8.6.a
  /usr/local/lib/libtkstub8.6.a
(base) lin@Lins-Air ~ % 

[lllllin001]

Please do not hesitate to let me know if there is any additional things you need from my end to get full picture of the problem. Thanks again, I have already purchased the license, and I have been struggled for days due to this issue that prevent me from actually using Morpheus.

[jdieg0]

Hi @lllllin001,

thanks. Now another problem has occured during installation:

Fetching morpheus-lab/morpheus/morpheus ==> Downloading https://gitlab.com/morpheus.lab/morpheus/-/archive/v2.3.3/morphe Already downloaded: /Users/lin/Library/Caches/Homebrew/downloads/ba54572de977d5dcf104366c0d79b878b093ca8afc8684b6d818c60ce0e18c5c--morpheus-v2.3.3.tar.gz Error: morpheus: SHA256 mismatch Expected: 3ec01bd841a39fda3e9a3d04e672a65847ebe9ded212715d50604faafac05302 Actual: b3e814a4b47dec1fb132701fa40a13708dc30f7027812dc35bd7fa90e59460cf File: /Users/lin/Library/Caches/Homebrew/downloads/ba54572de977d5dcf104366c0d79b878b093ca8afc8684b6d818c60ce0e18c5c--morpheus-v2.3.3.tar.gz To retry an incomplete download, remove the file above.

Could you please remove the old cache file as suggested by Homebrew:

rm /Users/lin/Library/Caches/Homebrew/downloads/ba54572de977d5dcf104366c0d79b878b093ca8afc8684b6d818c60ce0e18c5c--morpheus-v2.3.3.tar.gz

Or delete the entire temporary Homebrew file cache:

rm -rf $(brew --cache)

Then please retry the installation to reproduce the error you had in the first place and post your 02.make file:

Could you please run brew install morpheus again and after failure post the output of cat /Users/lin/Library/Logs/Homebrew/morpheus/02.make or attach that 02.make file by dragging and dropping it in the comment editor. Homebrew only printed the last 15 lines of the file and it seems that the details of the error are before that shown part.

Best, Diego

[lllllin001]

Dear Diego,

I remove the file, and retry the installation to reproduce the error:

(base) lin@Lins-Air ~ % cat /Users/lin/Library/Logs/Homebrew/morpheus/02.make
2023-03-28 16:41:10 +0000

make
install

/opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -S/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -B/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 --check-build-system CMakeFiles/Makefile.cmake 0
/opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_progress_start /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/CMakeFiles /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198//CMakeFiles/progress.marks
/Library/Developer/CommandLineTools/usr/bin/make  -f CMakeFiles/Makefile2 all
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/muParser/CMakeFiles/muParser.dir/build.make 3rdparty/muParser/CMakeFiles/muParser.dir/depend
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/xmlParser/CMakeFiles/xmlParser.dir/build.make 3rdparty/xmlParser/CMakeFiles/xmlParser.dir/depend
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/tiny-process/CMakeFiles/tiny-process-library.dir/build.make 3rdparty/tiny-process/CMakeFiles/tiny-process-library.dir/depend
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/gnuplot_i/CMakeFiles/gnuplot_interface.dir/build.make 3rdparty/gnuplot_i/CMakeFiles/gnuplot_interface.dir/depend
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp_autogen.dir/build.make 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp_autogen.dir/depend
/Library/Developer/CommandLineTools/usr/bin/make  -f morpheusML/CMakeFiles/MorpheusMLconv_dep.dir/build.make morpheusML/CMakeFiles/MorpheusMLconv_dep.dir/depend
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/xtl/CMakeFiles/xtl-dl.dir/build.make 3rdparty/xtl/CMakeFiles/xtl-dl.dir/depend
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/xsimd/CMakeFiles/xsimd-dl.dir/build.make 3rdparty/xsimd/CMakeFiles/xsimd-dl.dir/depend
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser/CMakeFiles/muParser.dir/DependInfo.cmake --color=
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xmlParser /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xmlParser /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xmlParser/CMakeFiles/xmlParser.dir/DependInfo.cmake --color=
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/tiny-process /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/tiny-process /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/tiny-process/CMakeFiles/tiny-process-library.dir/DependInfo.cmake --color=
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/gnuplot_i /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/gnuplot_i /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/gnuplot_i/CMakeFiles/gnuplot_interface.dir/DependInfo.cmake --color=
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp/CMakeFiles/qtsingleapp_autogen.dir/DependInfo.cmake --color=
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/CMakeFiles/xtl-dl.dir/DependInfo.cmake --color=
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheusML /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheusML /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheusML/CMakeFiles/MorpheusMLconv_dep.dir/DependInfo.cmake --color=
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/CMakeFiles/xsimd-dl.dir/DependInfo.cmake --color=
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/tiny-process/CMakeFiles/tiny-process-library.dir/build.make 3rdparty/tiny-process/CMakeFiles/tiny-process-library.dir/build
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/gnuplot_i/CMakeFiles/gnuplot_interface.dir/build.make 3rdparty/gnuplot_i/CMakeFiles/gnuplot_interface.dir/build
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/Library/Developer/CommandLineTools/usr/bin/make  -f morpheusML/CMakeFiles/MorpheusMLconv_dep.dir/build.make morpheusML/CMakeFiles/MorpheusMLconv_dep.dir/build
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/xmlParser/CMakeFiles/xmlParser.dir/build.make 3rdparty/xmlParser/CMakeFiles/xmlParser.dir/build
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/muParser/CMakeFiles/muParser.dir/build.make 3rdparty/muParser/CMakeFiles/muParser.dir/build
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp_autogen.dir/build.make 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp_autogen.dir/build
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/xsimd/CMakeFiles/xsimd-dl.dir/build.make 3rdparty/xsimd/CMakeFiles/xsimd-dl.dir/build
[  1%] Building CXX object 3rdparty/tiny-process/CMakeFiles/tiny-process-library.dir/process.cpp.o
[  2%] Generating MorpheusML conversion rules rules_2_3.xml
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/tiny-process && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/tiny-process -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -std=c++11 -Wall -Wextra -MD -MT 3rdparty/tiny-process/CMakeFiles/tiny-process-library.dir/process.cpp.o -MF CMakeFiles/tiny-process-library.dir/process.cpp.o.d -o CMakeFiles/tiny-process-library.dir/process.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/tiny-process/process.cpp
[  2%] Building CXX object 3rdparty/xmlParser/CMakeFiles/xmlParser.dir/xmlParser.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheusML && /usr/bin/xsltproc -o /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheusML/rules_2_3.xml.cpp rules2cpp.xslt rules_2_3.xml
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xmlParser && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -MD -MT 3rdparty/xmlParser/CMakeFiles/xmlParser.dir/xmlParser.cpp.o -MF CMakeFiles/xmlParser.dir/xmlParser.cpp.o.d -o CMakeFiles/xmlParser.dir/xmlParser.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xmlParser/xmlParser.cpp
[  2%] Automatic MOC for target qtsingleapp
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_autogen /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp/CMakeFiles/qtsingleapp_autogen.dir/AutogenInfo.json Release
[  3%] Creating directories for 'xtl-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -Dcfgdir= -P /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/tmp/xtl-dl-mkdirs.cmake
[  3%] Creating directories for 'xsimd-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -Dcfgdir= -P /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/tmp/xsimd-dl-mkdirs.cmake
[  4%] Building CXX object 3rdparty/muParser/CMakeFiles/muParser.dir/muParser.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -MD -MT 3rdparty/muParser/CMakeFiles/muParser.dir/muParser.cpp.o -MF CMakeFiles/muParser.dir/muParser.cpp.o.d -o CMakeFiles/muParser.dir/muParser.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser/muParser.cpp
[  5%] Building CXX object 3rdparty/gnuplot_i/CMakeFiles/gnuplot_interface.dir/gnuplot_i.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/gnuplot_i && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -MD -MT 3rdparty/gnuplot_i/CMakeFiles/gnuplot_interface.dir/gnuplot_i.cpp.o -MF CMakeFiles/gnuplot_interface.dir/gnuplot_i.cpp.o.d -o CMakeFiles/gnuplot_interface.dir/gnuplot_i.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/gnuplot_i/gnuplot_i.cpp
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-stamp/xsimd-dl-mkdir
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-stamp/xtl-dl-mkdir
[  6%] Generating MorpheusML conversion rules rules_3_4.xml
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheusML && /usr/bin/xsltproc -o /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheusML/rules_3_4.xml.cpp rules2cpp.xslt rules_3_4.xml
[  6%] Performing download step (git clone) for 'xsimd-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/tmp/xsimd-dl-gitclone.cmake
[  6%] Performing download step (git clone) for 'xtl-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/tmp/xtl-dl-gitclone.cmake
[  6%] Generating MorpheusML conversion rules rules_4_5.xml
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheusML && /usr/bin/xsltproc -o /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheusML/rules_4_5.xml.cpp rules2cpp.xslt rules_4_5.xml
[  7%] Generating MorpheusML conversion rules rules_5_4.xml
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheusML && /usr/bin/xsltproc -o /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheusML/rules_5_4.xml.cpp rules2cpp.xslt rules_5_4.xml
[  7%] Built target MorpheusMLconv_dep
[  7%] Building CXX object 3rdparty/tiny-process/CMakeFiles/tiny-process-library.dir/process_unix.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/tiny-process && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/tiny-process -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -std=c++11 -Wall -Wextra -MD -MT 3rdparty/tiny-process/CMakeFiles/tiny-process-library.dir/process_unix.cpp.o -MF CMakeFiles/tiny-process-library.dir/process_unix.cpp.o.d -o CMakeFiles/tiny-process-library.dir/process_unix.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/tiny-process/process_unix.cpp
Cloning into 'xsimd-dl'...
Cloning into 'xtl-dl'...
[  7%] Linking CXX static library libxmlParser.a
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xmlParser && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P CMakeFiles/xmlParser.dir/cmake_clean_target.cmake
[  7%] Built target qtsingleapp_autogen
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xmlParser && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_link_script CMakeFiles/xmlParser.dir/link.txt --verbose=1
[  7%] Building CXX object 3rdparty/muParser/CMakeFiles/muParser.dir/muParserBase.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -MD -MT 3rdparty/muParser/CMakeFiles/muParser.dir/muParserBase.cpp.o -MF CMakeFiles/muParser.dir/muParserBase.cpp.o.d -o CMakeFiles/muParser.dir/muParserBase.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser/muParserBase.cpp
"/usr/bin/ar" cr libxmlParser.a CMakeFiles/xmlParser.dir/xmlParser.cpp.o
/Library/Developer/CommandLineTools/usr/bin/make  -f gui/appdoc/CMakeFiles/AppDoc.dir/build.make gui/appdoc/CMakeFiles/AppDoc.dir/depend
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/CMakeFiles/AppDoc.dir/DependInfo.cmake --color=
"/usr/bin/ranlib" libxmlParser.a
/Library/Developer/CommandLineTools/usr/bin/make  -f gui/appdoc/CMakeFiles/AppDoc.dir/build.make gui/appdoc/CMakeFiles/AppDoc.dir/build
[  7%] Generating in-application documentation with Doxygen
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc && /opt/homebrew/bin/doxygen /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.doxy
[  7%] Built target xmlParser
warning: Tag 'TCL_SUBST' at line 229 of file '/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.doxy' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'COLS_IN_ALPHA_INDEX' at line 986 of file '/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.doxy' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'FORMULA_TRANSPARENT' at line 1399 of file '/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.doxy' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'LATEX_SOURCE_CODE' at line 1671 of file '/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.doxy' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 1993 of file '/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.doxy' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'CLASS_DIAGRAMS' at line 2006 of file '/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.doxy' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 2015 of file '/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.doxy' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'DOT_FONTNAME' at line 2057 of file '/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.doxy' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'DOT_FONTSIZE' at line 2064 of file '/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.doxy' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'DOT_TRANSPARENT' at line 2264 of file '/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.doxy' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
[  8%] Building CXX object 3rdparty/muParser/CMakeFiles/muParser.dir/muParserBytecode.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -MD -MT 3rdparty/muParser/CMakeFiles/muParser.dir/muParserBytecode.cpp.o -MF CMakeFiles/muParser.dir/muParserBytecode.cpp.o.d -o CMakeFiles/muParser.dir/muParserBytecode.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser/muParserBytecode.cpp
Doxygen version used: 1.9.6
Searching for include files...
Searching for example files...
Searching for images...
Searching for files in directory /private/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/doc/images
Searching for dot files...
Searching for msc files...
Searching for dia files...
Searching for files to exclude
Searching INPUT for files to process...
Reading and parsing tag files
Parsing files
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/docu.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/docu.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/cpm_sampler.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/cpm_sampler.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/interaction_energy.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/interaction_energy.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/expression_evaluator.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/expression_evaluator.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/cell_tracker.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/cell_tracker.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/clustering_tracker.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/clustering_tracker.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/contact_logger.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/contact_logger.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/displacement_tracker.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/displacement_tracker.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/external.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/external.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/gnuplotter.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/gnuplotter.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/histogram_logger.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/histogram_logger.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/logger2.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/logger2.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/tiff_plotter.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/tiff_plotter.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/vtk_plotter.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/vtk_plotter.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/dependency_graph.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/dependency_graph.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_cell_lattice.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_cell_lattice.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_cell_objects.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_cell_objects.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_circle.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_circle.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_distrib.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_distrib.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_hex_lattice.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_hex_lattice.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_rectangle.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_rectangle.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_voronoi.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_voronoi.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/tiff_reader.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/tiff_reader.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_poisson_disc.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_poisson_disc.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/csv_reader.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/csv_reader.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/add_on_adhesion.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/add_on_adhesion.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/homophilic_adhesion.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/homophilic_adhesion.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/heterophilic_adhesion.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/heterophilic_adhesion.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/mechanical_link.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/mechanical_link.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/cell_division.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/cell_division.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/cell_death.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/cell_death.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/add_cell.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/add_cell.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/change_celltype.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/change_celltype.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/insert_medium.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/insert_medium.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/chemotaxis.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/chemotaxis.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/haptotaxis.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/haptotaxis.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/directed_motion.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/directed_motion.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/persistent_motion.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/persistent_motion.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/freeze_motion.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/freeze_motion.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/protrusion.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/protrusion.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/star_convex.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/star_convex.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/neighborhood_reporter.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/neighborhood_reporter.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/neighborhood_vector_reporter.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/neighborhood_vector_reporter.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/mapper.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/mapper.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/vector_mapper.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/vector_mapper.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/motility_reporter.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/motility_reporter.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/volume_constraint.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/volume_constraint.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/surface_constraint.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/surface_constraint.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/interface_constraint.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/interface_constraint.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/length_constraint.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/length_constraint.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/connectivity_constraint.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/connectivity_constraint.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/diff_eqn.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/diff_eqn.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/equation.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/equation.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/field.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/field.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/function.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/m/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/field.h:72: warning: unable to resolve reference to 'Lattice_Data_Layer' for \ref command
/Library/Developer/CommandLineTools/usr/bin/make  -f morpheus/CMakeFiles/xmlSchema.dir/build.make morpheus/CMakeFiles/xmlSchema.dir/depend
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/CMakeFiles/xmlSchema.dir/DependInfo.cmake --color=
/Library/Developer/CommandLineTools/usr/bin/make  -f morpheus/CMakeFiles/xmlSchema.dir/build.make morpheus/CMakeFiles/xmlSchema.dir/build
[  8%] Linking CXX static library libtiny-process-library.a
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/tiny-process && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P CMakeFiles/tiny-process-library.dir/cmake_clean_target.cmake
[  9%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/simulation.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o simulation.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/base_types.xsd\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/simulation.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/tiny-process && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_link_script CMakeFiles/tiny-process-library.dir/link.txt --verbose=1
"/usr/bin/ar" cr libtiny-process-library.a "CMakeFiles/tiny-process-library.dir/process.cpp.o" "CMakeFiles/tiny-process-library.dir/process_unix.cpp.o"
"/usr/bin/ranlib" libtiny-process-library.a
orpheus/core/function.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/interfaces.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/interfaces.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/lattice_plugin.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/lattice_plugin.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/membrane_property.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/membrane_property.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/property.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/property.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/system.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/system.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/vector_equation.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/vector_equation.h...
Preprocessing /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/delay.h...
Parsing file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/delay.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Building concept list...
Computing nesting relations for classes...
Associating documentation with classes...
Associating documentation with concepts...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/cpm_sampler.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/delay.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6[  9%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/interaction_energy.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o interaction_energy.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/simulation.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/interaction_energy.xsd
[  9%] Built target tiny-process-library
[  9%] Building CXX object 3rdparty/muParser/CMakeFiles/muParser.dir/muParserCallback.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -MD -MT 3rdparty/muParser/CMakeFiles/muParser.dir/muParserCallback.cpp.o -MF CMakeFiles/muParser.dir/muParserCallback.cpp.o.d -o CMakeFiles/muParser.dir/muParserCallback.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser/muParserCallback.cpp
c245485ad013ac9cfa502cbe37f198/morpheus/core/diff_eqn.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/docu.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/equation.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/expression_evaluator.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/field.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/function.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/interaction_energy.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/interfaces.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/lattice_plugin.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/membrane_property.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/property.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/system.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/vector_equation.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/cell_tracker.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/clustering_tracker.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/contact_logger.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/dependency_graph.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/displacement_tracker.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/external.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/gnuplotter.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/histogram_logger.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/logger2.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/tiff_plotter.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/vtk_plotter.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/csv_reader.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_cell_lattice.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_cell_objects.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plug[  9%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/cell_tracker.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o cell_tracker.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/interaction_energy.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/cell_tracker.xsd
ins/initialization/init_circle.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_distrib.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_hex_lattice.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_poisson_disc.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_rectangle.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_voronoi.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/tiff_reader.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/add_on_adhesion.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/heterophilic_adhesion.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/homophilic_adhesion.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/mechanical_link.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/add_cell.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/cell_death.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/cell_division.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/change_celltype.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/insert_medium.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/chemotaxis.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/directed_motion.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/freeze_motion.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/haptotaxis.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/persistent_motion.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/protrusion.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/star_convex.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/mapper.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/motility_reporter.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/neighborhood_reporter.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheu[ 10%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/clustering_tracker.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o clustering_tracker.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/cell_tracker.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/clustering_tracker.xsd
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/change_celltype.h:27: warning: expected whitespace after \b command
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/external.h:28: warning: explicit link request to 'n' could not be resolved
[ 10%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/contact_logger.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o contact_logger.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/clustering_tracker.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/contact_logger.xsd
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/docu.h:322: warning: unable to resolve reference to 'ML_NeighborhoodReporter' for \ref command
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/logger2.h:165: warning: Found unknown command '@time'
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/logger2.h:190: warning: Found unknown command '@time'
[ 10%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/displacement_tracker.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o displacement_tracker.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/contact_logger.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/displacement_tracker.xsd
[ 11%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/external.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o external.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/displacement_tracker.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/external.xsd
[ 11%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/gnuplotter.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o gnuplotter.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/external.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/gnuplotter.xsd
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/expression_evaluator.h:96: warning: unable to resolve reference to 'EvaluatorCache' for \ref command
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/field.h:72: warning: unable to resolve reference to 'Lattice_Data_Layer' for \ref command
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/field.h:72: warning: unable to resolve reference to 'Lattice_Data_Layer' for \ref command
[ 12%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/histogram_logger.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o histogram_logger.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/gnuplotter.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/histogram_logger.xsd
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/field.h:72: warning: unable to resolve reference to 'Lattice_Data_Layer' for \ref command
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/field.h:72: warning: unable to resolve reference to 'Lattice_Data_Layer' for \ref command
s-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/neighborhood_vector_reporter.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/vector_mapper.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/connectivity_constraint.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/interface_constraint.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/length_constraint.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/surface_constraint.h...
Generating code for file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/volume_constraint.h...
Generating file documentation...
Generating page documentation...
Generating docs for page PluginDev...
Generating group documentation...
Generating class documentation...
Generating docs for compound AbstractProperty...
Generating docs for compound AddonAdhesion...
Generating docs for compound AnalysisPlugin...
Generating docs for compound Cell_Update_Checker...
Generating docs for compound Cell_Update_Listener...
Generating docs for compound Cluster...
Generating docs for compound ConstantSymbol...
Generating docs for compound Container...
Generating docs for compound ContinuousProcessPlugin...
Generating docs for compound ContinuousSystem...
Generating docs for compound CPM_Energy...
Generating docs for compound CPM_Interaction_Addon...
Generating docs for compound CPM_Interaction_Overrider...
Generating docs for compound DependencyGraph...
Generating docs for compound DetachedProcess...
Generating docs for compound DifferentialEqn...
Generating docs for compound DiscreteSystem...
Generating docs for compound DisplacementTracker...
Generating docs for compound EventSystem...
Generating docs for compound ExpressionEvaluator...
Generating docs for compound FieldAccessor...
Generating docs for compound FieldPainter...
Generating docs for nested compound Gnuplotter::PlotSpec...
Generating docs for compound HistogramLogger...
Generating docs for compound HomophilicAdhesion...
Generating docs for nested compound InitCellObjects::CellObject...
Generating docs for compound InstantaneousProcessPlugin...
Generating docs for compound LoggerGnuplotWriter...
Generating docs for compound LoggerTextWriter...
Generating docs for compound MembraneProperty...
Generating docs for compound MembranePropertyPlugin...
Generating docs for compound MembranePropertySymbol...
Generating docs for compound MembraneSpaceSymbol...
Generating docs for compound PDE_Layer...
Generating docs for compound Plugin...
Generating docs for compound Property...
Generating docs for compound PropertySymbol...
Generating docs for compound ReporterPlugin...
Generating docs for compound Spot...
Generating docs for compound System...
Generating docs for compound SystemFunc...
Generating docs for compound SystemSolver...
Generating docs for compound ThreadedExpressionEvaluator...
Generating docs for compound TimeStepListener...
Generating docs for compound TriggeredSystem...
Generating docs for compound VariableSymbol...
Generating concept documentation...
Generating namespace index...
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating module index...
Generating namespace member index...
Generating concept index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
type lookup cache used 3212/65536 hits=4376 misses=3464
symbol lookup cache used 3558/65536 hits=16492 misses=3558
finished...
[ 12%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/logger2.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o logger2.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/histogram_logger.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/logger2.xsd
[ 13%] Generating html/morpheus.qhp
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E copy_directory /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/MathJax /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/html/MathJax
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -DPROJECT_SOURCE_DIR="/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198" -P patch_qhp.cmake
[ 13%] Assembling in-application documentation with qhelpgenerator
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc && /opt/homebrew/opt/qt@5/bin/qhelpgenerator /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/html/morpheus.qhp -o /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/gui/appdoc/morpheus.qch
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/libSBML/CMakeFiles/libSBML.dir/build.make 3rdparty/libSBML/CMakeFiles/libSBML.dir/depend
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/CMakeFiles/libSBML.dir/DependInfo.cmake --color=
[ 13%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/tiff_plotter.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o tiff_plotter.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/logger2.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/tiff_plotter.xsd
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/libSBML/CMakeFiles/libSBML.dir/build.make 3rdparty/libSBML/CMakeFiles/libSBML.dir/build
[ 13%] Creating directories for 'libSBML'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -Dcfgdir= -P /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/tmp/libSBML-mkdirs.cmake
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-mkdir
[ 13%] Building CXX object 3rdparty/muParser/CMakeFiles/muParser.dir/muParserError.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -MD -MT 3rdparty/muParser/CMakeFiles/muParser.dir/muParserError.cpp.o -MF CMakeFiles/muParser.dir/muParserError.cpp.o.d -o CMakeFiles/muParser.dir/muParserError.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser/muParserError.cpp
[ 14%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/vtk_plotter.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o vtk_plotter.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/tiff_plotter.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/vtk_plotter.xsd
[ 15%] Performing download step (download, verify and extract) for 'libSBML'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/download-libSBML.cmake
-- Downloading...
   dst='/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/download/libSBML-5.17.0-core-plus-packages-src.tar.gz'
   timeout='none'
   inactivity timeout='none'
-- Using src='http://imc.zih.tu-dresden.de/morpheus/packages/source/libSBML-5.17.0-core-plus-packages-src.tar.gz'
[ 15%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/dependency_graph.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o dependency_graph.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/vtk_plotter.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/analysis/dependency_graph.xsd
[ 15%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_cell_lattice.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o init_cell_lattice.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/dependency_graph.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_cell_lattice.xsd
[ 16%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_cell_objects.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o init_cell_objects.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/init_cell_lattice.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_cell_objects.xsd
[ 16%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_circle.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o init_circle.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/init_cell_objects.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_circle.xsd
[ 17%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_distrib.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o init_distrib.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/init_circle.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_distrib.xsd
[ 17%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_hex_lattice.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o init_hex_lattice.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/init_distrib.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_hex_lattice.xsd
[ 17%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_rectangle.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o init_rectangle.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/init_hex_lattice.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_rectangle.xsd
[ 18%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_voronoi.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o init_voronoi.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/init_rectangle.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_voronoi.xsd
[ 18%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/tiff_reader.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o tiff_reader.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/init_voronoi.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/tiff_reader.xsd
[ 18%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_poisson_disc.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o init_poisson_disc.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/tiff_reader.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/init_poisson_disc.xsd
[ 19%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/csv_reader.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o csv_reader.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/init_poisson_disc.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/initialization/csv_reader.xsd
[ 19%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/add_on_adhesion.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o add_on_adhesion.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/csv_reader.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/add_on_adhesion.xsd
[ 19%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/homophilic_adhesion.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o homophilic_adhesion.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/add_on_adhesion.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/homophilic_adhesion.xsd
[ 20%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/heterophilic_adhesion.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o heterophilic_adhesion.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/homophilic_adhesion.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/heterophilic_adhesion.xsd
[ 20%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/mechanical_link.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o mechanical_link.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/heterophilic_adhesion.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/interaction/mechanical_link.xsd
[ 21%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/cell_division.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o cell_division.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/mechanical_link.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/cell_division.xsd
[ 21%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/cell_death.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o cell_death.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/cell_division.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/cell_death.xsd
Building up file structure...
Insert custom filters...
Insert help data for filter section (1 of 1)...
Insert files...
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Documentation successfully generated.
[ 21%] Generating documentation with Doxygen
[ 21%] Built target AppDoc
[ 21%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/add_cell.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o add_cell.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/cell_death.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/add_cell.xsd
[ 22%] Building CXX object 3rdparty/muParser/CMakeFiles/muParser.dir/muParserInt.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -MD -MT 3rdparty/muParser/CMakeFiles/muParser.dir/muParserInt.cpp.o -MF CMakeFiles/muParser.dir/muParserInt.cpp.o.d -o CMakeFiles/muParser.dir/muParserInt.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser/muParserInt.cpp
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp.dir/build.make 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp.dir/depend
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp/CMakeFiles/qtsingleapp.dir/DependInfo.cmake --color=
/Library/Developer/CommandLineTools/usr/bin/make  -f 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp.dir/build.make 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp.dir/build
[ 23%] Building CXX object 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp.dir/qtsingleapp_autogen/mocs_compilation.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp/qtsingleapp_autogen/include -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -iframework /opt/homebrew/opt/qt@5/lib -isystem /opt/homebrew/opt/qt@5/lib/QtNetwork.framework/Headers -isystem /opt/homebrew/opt/qt@5/lib/QtCore.framework/Headers -isystem /opt/homebrew/opt/qt@5/./mkspecs/macx-clang -isystem /opt/homebrew/opt/qt@5/lib/QtWidgets.framework/Headers -isystem /opt/homebrew/opt/qt@5/lib/QtGui.framework/Headers -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -fPIC -MD -MT 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp.dir/qtsingleapp_autogen/mocs_compilation.cpp.o -MF CMakeFiles/qtsingleapp.dir/qtsingleapp_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/qtsingleapp.dir/qtsingleapp_autogen/mocs_compilation.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp/qtsingleapp_autogen/mocs_compilation.cpp
[ 24%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/change_celltype.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o change_celltype.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/add_cell.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/change_celltype.xsd
[ 24%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/insert_medium.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o insert_medium.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/change_celltype.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/miscellaneous/insert_medium.xsd
/Library/Developer/CommandLineTools/usr/bin/make  -f xmlutils/CMakeFiles/XMLUtils.dir/build.make xmlutils/CMakeFiles/XMLUtils.dir/depend
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_depends "Unix Makefiles" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/CMakeFiles/XMLUtils.dir/DependInfo.cmake --color=
[ 24%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/chemotaxis.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o chemotaxis.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/insert_medium.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/chemotaxis.xsd
/Library/Developer/CommandLineTools/usr/bin/make  -f xmlutils/CMakeFiles/XMLUtils.dir/build.make xmlutils/CMakeFiles/XMLUtils.dir/build
[ 25%] Building CXX object xmlutils/CMakeFiles/XMLUtils.dir/string_functions.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -MD -MT xmlutils/CMakeFiles/XMLUtils.dir/string_functions.cpp.o -MF CMakeFiles/XMLUtils.dir/string_functions.cpp.o.d -o CMakeFiles/XMLUtils.dir/string_functions.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp
[ 26%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/haptotaxis.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o haptotaxis.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/chemotaxis.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/haptotaxis.xsd
[ 26%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/directed_motion.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o directed_motion.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/haptotaxis.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/directed_motion.xsd
[ 26%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/persistent_motion.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o persistent_motion.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/directed_motion.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/persistent_motion.xsd
HEAD is now at aa40bc4 Release 0.7.0
[ 27%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/freeze_motion.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o freeze_motion.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/persistent_motion.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/freeze_motion.xsd
[ 27%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/protrusion.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o protrusion.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/freeze_motion.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/protrusion.xsd
[ 28%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/star_convex.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o star_convex.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/protrusion.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/motility/star_convex.xsd
[ 28%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/neighborhood_reporter.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o neighborhood_reporter.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/star_convex.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/neighborhood_reporter.xsd
[ 28%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/neighborhood_vector_reporter.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o neighborhood_vector_reporter.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/neighborhood_reporter.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/neighborhood_vector_reporter.xsd
[ 28%] Linking CXX static library libgnuplot_interface.a
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/gnuplot_i && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P CMakeFiles/gnuplot_interface.dir/cmake_clean_target.cmake
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/gnuplot_i && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_link_script CMakeFiles/gnuplot_interface.dir/link.txt --verbose=1
"/usr/bin/ar" cr libgnuplot_interface.a CMakeFiles/gnuplot_interface.dir/gnuplot_i.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-stamp/xtl-dl-download
[ 29%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/mapper.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o mapper.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/neighborhood_vector_reporter.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/mapper.xsd
[ 30%] Performing update step for 'xtl-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/tmp/xtl-dl-gitupdate.cmake
"/usr/bin/ranlib" libgnuplot_interface.a
[ 30%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/vector_mapper.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o vector_mapper.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/mapper.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/vector_mapper.xsd
[ 30%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/motility_reporter.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o motility_reporter.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/vector_mapper.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/reporters/motility_reporter.xsd
[ 30%] Built target gnuplot_interface
[ 30%] Building CXX object 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp.dir/qtlocalpeer.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp/qtsingleapp_autogen/include -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -iframework /opt/homebrew/opt/qt@5/lib -isystem /opt/homebrew/opt/qt@5/lib/QtNetwork.framework/Headers -isystem /opt/homebrew/opt/qt@5/lib/QtCore.framework/Headers -isystem /opt/homebrew/opt/qt@5/./mkspecs/macx-clang -isystem /opt/homebrew/opt/qt@5/lib/QtWidgets.framework/Headers -isystem /opt/homebrew/opt/qt@5/lib/QtGui.framework/Headers -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -fPIC -MD -MT 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp.dir/qtlocalpeer.cpp.o -MF CMakeFiles/qtsingleapp.dir/qtlocalpeer.cpp.o.d -o CMakeFiles/qtsingleapp.dir/qtlocalpeer.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp/qtlocalpeer.cpp
[ 31%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/volume_constraint.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o volume_constraint.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/motility_reporter.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/volume_constraint.xsd
[ 31%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/surface_constraint.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o surface_constraint.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/volume_constraint.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/surface_constraint.xsd
[ 32%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/interface_constraint.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o interface_constraint.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/surface_constraint.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/interface_constraint.xsd
[ 32%] No patch step for 'xtl-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E echo_append
[ 32%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/length_constraint.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o length_constraint.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/interface_constraint.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/length_constraint.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-stamp/xtl-dl-patch
[ 32%] Building CXX object 3rdparty/muParser/CMakeFiles/muParser.dir/muParserTokenReader.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -MD -MT 3rdparty/muParser/CMakeFiles/muParser.dir/muParserTokenReader.cpp.o -MF CMakeFiles/muParser.dir/muParserTokenReader.cpp.o.d -o CMakeFiles/muParser.dir/muParserTokenReader.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser/muParserTokenReader.cpp
[ 33%] Performing configure step for 'xtl-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -DCMAKE_INSTALL_PREFIX=/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty "-GUnix Makefiles" -S /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl -B /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-build
[ 33%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/connectivity_constraint.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o connectivity_constraint.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/length_constraint.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/plugins/shape/connectivity_constraint.xsd
[ 34%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/cpm_sampler.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o cpm_sampler.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/connectivity_constraint.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/cpm_sampler.xsd
[ 34%] Building CXX object xmlutils/CMakeFiles/XMLUtils.dir/xml_functions.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++  -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -MD -MT xmlutils/CMakeFiles/XMLUtils.dir/xml_functions.cpp.o -MF CMakeFiles/XMLUtils.dir/xml_functions.cpp.o.d -o CMakeFiles/XMLUtils.dir/xml_functions.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/xml_functions.cpp
[ 34%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/diff_eqn.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o diff_eqn.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/cpm_sampler.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/diff_eqn.xsd
[ 34%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/equation.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o equation.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/diff_eqn.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/equation.xsd
-- [download 100% complete]
[ 35%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/field.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o field.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/equation.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/field.xsd
-- The C compiler identification is AppleClang 13.0.0.13000029
[ 35%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/function.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o function.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/field.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/function.xsd
[ 35%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/interfaces.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o interfaces.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/function.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/interfaces.xsd
-- The CXX compiler identification is AppleClang 13.0.0.13000029
-- Detecting C compiler ABI info
[ 36%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/lattice_plugin.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o lattice_plugin.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/interfaces.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/lattice_plugin.xsd
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp:1:
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:38:12: error: no member named 'map' in namespace 'std'; did you mean 'max'?
using std::map;
      ~~~~~^~~
           max
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/algorithm:2648:1: note: 'max' declared here
max(const _Tp& __a, const _Tp& __b, _Compare __comp)
^
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp:1:
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:214:52: error: no template named 'map' in namespace 'std'; did you mean 'max'?
std::ostream& operator << (std::ostream& out, std::map<T1,T2> m) {
                                              ~~~~~^~~
                                                   max
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/algorithm:2648:1: note: 'max' declared here
max(const _Tp& __a, const _Tp& __b, _Compare __comp)
^
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp:1:
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:214:47: error: expected parameter declarator
std::ostream& operator << (std::ostream& out, std::map<T1,T2> m) {
                                              ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:214:63: error: expected ')'
std::ostream& operator << (std::ostream& out, std::map<T1,T2> m) {
                                                              ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:214:27: note: to match this '('
std::ostream& operator << (std::ostream& out, std::map<T1,T2> m) {
                          ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:214:15: error: overloaded 'operator<<' must be a binary operator (has 1 parameter)
std::ostream& operator << (std::ostream& out, std::map<T1,T2> m) {
              ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:215:7: error: use of undeclared identifier 'm'
        copy(m.begin(), m.end(), std::ostream_iterator<std::pair<T1,T2> >(out,";"));
             ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:215:18: error: use of undeclared identifier 'm'
        copy(m.begin(), m.end(), std::ostream_iterator<std::pair<T1,T2> >(out,";"));
                        ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:219:51: error: no template named 'map' in namespace 'std'; did you mean 'max'?
std::istream& operator >> (std::istream& in, std::map<T1,T2>& m) {
                                             ~~~~~^~~
                                                  max
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/algorithm:2648:1: note: 'max' declared here
max(const _Tp& __a, const _Tp& __b, _Compare __comp)
^
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp:1:
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:219:46: error: expected parameter declarator
std::istream& operator >> (std::istream& in, std::map<T1,T2>& m) {
                                             ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:219:61: error: expected ')'
std::istream& operator >> (std::istream& in, std::map<T1,T2>& m) {
                                                            ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:219:27: note: to match this '('
std::istream& operator >> (std::istream& in, std::map<T1,T2>& m) {
                          ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:219:15: error: overloaded 'operator>>' must be a binary operator (has 1 parameter)
std::istream& operator >> (std::istream& in, std::map<T1,T2>& m) {
              ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:224:3: error: use of undeclared identifier 'm'
                m[tmp.first] = tmp.second;
                ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp:20:7: error: no template named 'map' in namespace 'std'; did you mean 'max'?
        std::map< int, std::pair<int,int> > placeholders;
        ~~~~~^~~
             max
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/algorithm:2648:1: note: 'max' declared here
max(const _Tp& __a, const _Tp& __b, _Compare __comp)
^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp:20:37: error: expected ';' after expression
        std::map< int, std::pair<int,int> > placeholders;
                                           ^
                                           ;
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp:20:2: error: reference to overloaded function could not be resolved; did you mean to call it?
        std::map< int, std::pair<int,int> > placeholders;
        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/algorithm:2648:1: note: possible target for call
max(const _Tp& __a, const _Tp& __b, _Compare __comp)
^
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/algorithm:2657:1: note: possible target for call
max(const _Tp& __a, const _Tp& __b)
^
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/algorithm:2668:1: note: possible target for call
max(initializer_list<_Tp> __t, _Compare __comp)
^
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/algorithm:2677:1: note: possible target for call
max(initializer_list<_Tp> __t)
^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp:20:38: error: use of undeclared identifier 'placeholders'; did you mean 'std::placeholders'?
        std::map< int, std::pair<int,int> > placeholders;
                                            ^~~~~~~~~~~~
                                            std::placeholders
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/functional:2639:11: note: 'std::placeholders' declared here
namespace placeholders
          ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp:20:38: error: unexpected namespace name 'placeholders': expected expression
        std::map< int, std::pair<int,int> > placeholders;
                                            ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp:24:3: error: use of undeclared identifier 'placeholders'
                placeholders.insert({std::atoi(match.str(1).c_str()), {match.position(), match.length()}});
                ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.cpp:27:7: error: use of undeclared identifier 'placeholders'
        if (!placeholders.empty()) {
             ^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
20 errors generated.
[ 36%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/membrane_property.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o membrane_property.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/lattice_plugin.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/membrane_property.xsd
make[2]: *** [xmlutils/CMakeFiles/XMLUtils.dir/string_functions.cpp.o] Error 1
make[2]: *** Waiting for unfinished jobs....
[ 36%] Building CXX object 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp.dir/qtsingleapplication.cpp.o
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp && /opt/homebrew/Library/Homebrew/shims/mac/super/clang++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp/qtsingleapp_autogen/include -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198 -I/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -iframework /opt/homebrew/opt/qt@5/lib -isystem /opt/homebrew/opt/qt@5/lib/QtNetwork.framework/Headers -isystem /opt/homebrew/opt/qt@5/lib/QtCore.framework/Headers -isystem /opt/homebrew/opt/qt@5/./mkspecs/macx-clang -isystem /opt/homebrew/opt/qt@5/lib/QtWidgets.framework/Headers -isystem /opt/homebrew/opt/qt@5/lib/QtGui.framework/Headers -O3 -DNDEBUG -std=gnu++17 -flto=thin -arch arm64 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk -fPIC -MD -MT 3rdparty/qtsingleapp/CMakeFiles/qtsingleapp.dir/qtsingleapplication.cpp.o -MF CMakeFiles/qtsingleapp.dir/qtsingleapplication.cpp.o.d -o CMakeFiles/qtsingleapp.dir/qtsingleapplication.cpp.o -c /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp/qtsingleapplication.cpp
[ 37%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/property.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o property.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/membrane_property.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/property.xsd
[ 37%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/system.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o system.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/property.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/system.xsd
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /opt/homebrew/Library/Homebrew/shims/mac/super/clang - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
[ 37%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/vector_equation.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o vector_equation.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/system.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/vector_equation.xsd
[ 38%] Merging in /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/delay.xsd into morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xsltproc -o delay.xsd_merged --param with \"/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/vector_equation.xsd_merged\" /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/merge.xslt /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/core/delay.xsd
[ 38%] Pretty formatting XML schema morpheus.xsd
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus && /usr/bin/xmllint --format --noblanks --output morpheus.xsd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/morpheus/delay.xsd_merged
[ 38%] Built target xmlSchema
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/xml_functions.cpp:1:
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/xml_functions.h:17:
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:38:12: error: no member named 'map' in namespace 'std'; did you mean 'max'?
using std::map;
      ~~~~~^~~
           max
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/algorithm:2648:1: note: 'max' declared here
max(const _Tp& __a, const _Tp& __b, _Compare __comp)
^
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/xml_functions.cpp:1:
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/xml_functions.h:17:
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:214:52: error: no template named 'map' in namespace 'std'; did you mean 'max'?
std::ostream& operator << (std::ostream& out, std::map<T1,T2> m) {
                                              ~~~~~^~~
                                                   max
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/algorithm:2648:1: note: 'max' declared here
max(const _Tp& __a, const _Tp& __b, _Compare __comp)
^
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/xml_functions.cpp:1:
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/xml_functions.h:17:
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:214:47: error: expected parameter declarator
std::ostream& operator << (std::ostream& out, std::map<T1,T2> m) {
                                              ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:214:63: error: expected ')'
std::ostream& operator << (std::ostream& out, std::map<T1,T2> m) {
                                                              ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:214:27: note: to match this '('
std::ostream& operator << (std::ostream& out, std::map<T1,T2> m) {
                          ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:214:15: error: overloaded 'operator<<' must be a binary operator (has 1 parameter)
std::ostream& operator << (std::ostream& out, std::map<T1,T2> m) {
              ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:215:7: error: use of undeclared identifier 'm'
        copy(m.begin(), m.end(), std::ostream_iterator<std::pair<T1,T2> >(out,";"));
             ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:215:18: error: use of undeclared identifier 'm'
        copy(m.begin(), m.end(), std::ostream_iterator<std::pair<T1,T2> >(out,";"));
                        ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:219:51: error: no template named 'map' in namespace 'std'; did you mean 'max'?
std::istream& operator >> (std::istream& in, std::map<T1,T2>& m) {
                                             ~~~~~^~~
                                                  max
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/algorithm:2648:1: note: 'max' declared here
max(const _Tp& __a, const _Tp& __b, _Compare __comp)
^
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/xml_functions.cpp:1:
In file included from /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/xml_functions.h:17:
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:219:46: error: expected parameter declarator
std::istream& operator >> (std::istream& in, std::map<T1,T2>& m) {
                                             ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:219:61: error: expected ')'
std::istream& operator >> (std::istream& in, std::map<T1,T2>& m) {
                                                            ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:219:27: note: to match this '('
std::istream& operator >> (std::istream& in, std::map<T1,T2>& m) {
                          ^
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:219:15: error: overloaded 'operator>>' must be a binary operator (has 1 parameter)
std::istream& operator >> (std::istream& in, std::map<T1,T2>& m) {
              ^
-- Detecting CXX compiler ABI info - done
/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/xmlutils/string_functions.h:224:3: error: use of undeclared identifier 'm'
                m[tmp.first] = tmp.second;
                ^
-- Check for working CXX compiler: /opt/homebrew/Library/Homebrew/shims/mac/super/clang++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- xtl v0.7.0
[ 38%] Linking CXX static library libmuParser.a
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P CMakeFiles/muParser.dir/cmake_clean_target.cmake
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/muParser && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_link_script CMakeFiles/muParser.dir/link.txt --verbose=1
-- Configuring done (0.8s)
"/usr/bin/ar" cr libmuParser.a CMakeFiles/muParser.dir/muParser.cpp.o CMakeFiles/muParser.dir/muParserBase.cpp.o CMakeFiles/muParser.dir/muParserBytecode.cpp.o CMakeFiles/muParser.dir/muParserCallback.cpp.o CMakeFiles/muParser.dir/muParserError.cpp.o CMakeFiles/muParser.dir/muParserInt.cpp.o CMakeFiles/muParser.dir/muParserTokenReader.cpp.o
-- Generating done (0.0s)
-- Build files have been written to: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-build
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-stamp/xtl-dl-configure
[ 38%] Performing build step for 'xtl-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-build && /Library/Developer/CommandLineTools/usr/bin/make
"/usr/bin/ranlib" libmuParser.a
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-stamp/xtl-dl-build
12 errors generated.
make[2]: *** [xmlutils/CMakeFiles/XMLUtils.dir/xml_functions.cpp.o] Error 1
make[1]: *** [xmlutils/CMakeFiles/XMLUtils.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
[ 38%] Built target muParser
[ 38%] Performing install step for 'xtl-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-build && /Library/Developer/CommandLineTools/usr/bin/make install
HEAD is now at 0c8e9e7 Release 7.4.9
Install the project...
-- Install configuration: ""
-- [download 0% complete]
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xany.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xbasic_fixed_string.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xbase64.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xclosure.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xcomplex.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xcomplex_sequence.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xspan.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xspan_impl.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xdynamic_bitset.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xfunctional.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xhalf_float.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xhalf_float_impl.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xhash.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xhierarchy_generator.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xiterator_base.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xjson.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xmasked_value_meta.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xmasked_value.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xmeta_utils.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xmultimethods.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xoptional_meta.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xoptional.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xoptional_sequence.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xplatform.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xproxy_wrapper.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xsequence.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xsystem.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xtl_config.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xtype_traits.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xvariant.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xvariant_impl.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xtl/xvisitor.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/share/cmake/xtl/xtlConfig.cmake
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/share/cmake/xtl/xtlConfigVersion.cmake
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/share/cmake/xtl/xtlTargets.cmake
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/share/pkgconfig/xtl.pc
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-stamp/xtl-dl-install
[ 38%] Completed 'xtl-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E make_directory /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/CMakeFiles
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/CMakeFiles/xtl-dl-complete
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xtl/xtl-dl-prefix/src/xtl-dl-stamp/xtl-dl-done
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-stamp/xsimd-dl-download
[ 38%] Built target xtl-dl
[ 39%] Performing update step for 'xsimd-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/tmp/xsimd-dl-gitupdate.cmake
[ 40%] Linking CXX static library libqtsingleapp.a
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P CMakeFiles/qtsingleapp.dir/cmake_clean_target.cmake
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/qtsingleapp && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E cmake_link_script CMakeFiles/qtsingleapp.dir/link.txt --verbose=1
"/usr/bin/ar" cr libqtsingleapp.a CMakeFiles/qtsingleapp.dir/qtsingleapp_autogen/mocs_compilation.cpp.o CMakeFiles/qtsingleapp.dir/qtlocalpeer.cpp.o CMakeFiles/qtsingleapp.dir/qtsingleapplication.cpp.o
"/usr/bin/ranlib" libqtsingleapp.a
[ 40%] No patch step for 'xsimd-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E echo_append
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-stamp/xsimd-dl-patch
[ 40%] Built target qtsingleapp
[ 41%] Performing configure step for 'xsimd-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -DCMAKE_INSTALL_PREFIX=/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -DCMAKE_PREFIX_PATH= "-GUnix Makefiles" -S /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl -B /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-build
-- The C compiler identification is AppleClang 13.0.0.13000029
-- The CXX compiler identification is AppleClang 13.0.0.13000029
-- Detecting C compiler ABI info
-- [download 1% complete]
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /opt/homebrew/Library/Homebrew/shims/mac/super/clang - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/homebrew/Library/Homebrew/shims/mac/super/clang++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- xsimd v7.4.9
-- Configuring done (0.4s)
-- Generating done (0.0s)
-- Build files have been written to: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-build
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-stamp/xsimd-dl-configure
[ 41%] Performing build step for 'xsimd-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-build && /Library/Developer/CommandLineTools/usr/bin/make
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-stamp/xsimd-dl-build
[ 42%] Performing install step for 'xsimd-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-build && /Library/Developer/CommandLineTools/usr/bin/make install
Install the project...
-- Install configuration: ""
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_uint32.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx_int16.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_sse_conversion.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx512_conversion.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_fallback.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx_int8.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_sse_double.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx512_complex.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_sse_int64.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx512_double.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx512_float.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_utils.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx512_int32.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_sse_int16.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_complex.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_complex_base.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_conversion.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_float.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx_int_base.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx_int64.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_base.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_int32.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_uint64.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_int16.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_bool.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_types_include.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_uint8.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_base_bool.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx_conversion.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_traits.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx512_int16.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx512_int_base.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx_double.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_sse_int32.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx512_bool.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_sse_float.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_sse_int_base.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_sse_int8.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_double.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_sse_complex.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_int8.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_int_conversion.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx512_int64.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx_complex.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx_float.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_utils.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx512_int8.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_uint16.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_avx_int32.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/types/xsimd_neon_int64.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/memory
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/memory/xsimd_load_store.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/memory/xsimd_alignment.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/memory/xsimd_aligned_allocator.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/memory/xsimd_aligned_stack_buffer.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/config
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/config/xsimd_include.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/config/xsimd_config.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/config/xsimd_align.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/config/xsimd_instruction_set.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/stl
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/stl/algorithms.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/stl/iterator.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_trigo_reduction.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_error.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_exp_reduction.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_horner.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_hyperbolic.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_fp_manipulation.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_math.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_scalar.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_gamma.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_math_complex.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_logarithm.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_trigonometric.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_estrin.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_exponential.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_power.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_numerical_constant.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_fp_sign.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_rounding.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_rem_pio2.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_basic_math.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/math/xsimd_invtrigo.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/xsimd/xsimd.hpp
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/lib/cmake/xsimd/xsimdConfig.cmake
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/lib/cmake/xsimd/xsimdConfigVersion.cmake
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/lib/cmake/xsimd/xsimdTargets.cmake
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/lib/pkgconfig/xsimd.pc
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-stamp/xsimd-dl-install
[ 42%] Completed 'xsimd-dl'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E make_directory /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/CMakeFiles
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/CMakeFiles/xsimd-dl-complete
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/xsimd/xsimd-dl-prefix/src/xsimd-dl-stamp/xsimd-dl-done
[ 42%] Built target xsimd-dl
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* Closing connection 0
* Closing connection 1
-- Downloading... done
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/verify-libSBML.cmake
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -P /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/extract-libSBML.cmake
-- extracting...
     src='/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/download/libSBML-5.17.0-core-plus-packages-src.tar.gz'
     dst='/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/src'
-- extracting... [tar xfz]
-- extracting... [analysis]
-- extracting... [rename]
-- extracting... [clean up]
-- extracting... done
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-download
[ 42%] No update step for 'libSBML'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E echo_append
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-update
[ 43%] No patch step for 'libSBML'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E echo_append
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-patch
[ 43%] Performing configure step for 'libSBML'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -DLIBSBML_SKIP_SHARED_LIBRARY=TRUE -DWITH_JAVA=FALSE -DWITH_PYTHON=OFF -DWITH_SWIG=OFF -DWITH_LIBXML=TRUE -DENABLE_COMP=TRUE -DCMAKE_INSTALL_PREFIX=/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty -DWITH_CPP_NAMESPACE=TRUE -DCMAKE_CXX_COMPILER=/opt/homebrew/Library/Homebrew/shims/mac/super/clang++ -DCMAKE_C_COMPILER=/opt/homebrew/Library/Homebrew/shims/mac/super/clang -G "Unix Makefiles" -DWITH_BZIP2=TRUE "-GUnix Makefiles" -C/tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/tmp/libSBML-cache-Release.cmake -S /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/src -B /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/build
loading initial cache file /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/tmp/libSBML-cache-Release.cmake
CMake Deprecation Warning at CMakeLists.txt:34 (cmake_minimum_required):
  Compatibility with CMake < 2.8.12 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.

-- The C compiler identification is AppleClang 13.0.0.13000029
-- The CXX compiler identification is AppleClang 13.0.0.13000029
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /opt/homebrew/Library/Homebrew/shims/mac/super/clang - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/homebrew/Library/Homebrew/shims/mac/super/clang++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Deprecation Warning at CMakeLists.txt:42 (cmake_policy):
  The OLD behavior for policy CMP0058 will be removed from a future version
  of CMake.

  The cmake-policies(7) manual explains that the OLD behaviors of all
  policies are deprecated and that a policy should be set to OLD only under
  specific short-term circumstances.  Projects should be ported to the NEW
  behavior and not rely on setting a policy to OLD.

-- Check for working C compiler: /opt/homebrew/Library/Homebrew/shims/mac/super/clang - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Looking for BZ2_bzCompressInit in /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib/libbz2.tbd
-- Looking for BZ2_bzCompressInit in /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib/libbz2.tbd - found
-- Looking for gzopen in /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib/libz.tbd
-- Looking for gzopen in /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib/libz.tbd - found
-- Looking for include file check.h
-- Looking for include file check.h - not found
-- Looking for include file expat.h
-- Looking for include file expat.h - found
-- Looking for include file errno.h
-- Looking for include file errno.h - found
-- Looking for include file ieeefp.h
-- Looking for include file ieeefp.h - not found
-- Looking for include file math.h
-- Looking for include file math.h - found
-- Looking for include file sys/types.h
-- Looking for include file sys/types.h - found
-- Looking for include file float.h
-- Looking for include file float.h - found
-- Looking for sqrt in m
-- Looking for sqrt in m - found
-- 
----------------------------------------------------------------------
libSBML version 5.17.0
----------------------------------------------------------------------

   More information and the latest version are available online at
   http://sbml.org/Software/libSBML

   Please report problems using the issue tracker at
   http://sbml.org/Software/libsbml/issue-tracker

   To contact the developers directly, email libsbml-team@googlegroups.com

   Configured on host 'Lins-Air'
     host type                       = Darwin
     host operating system           = Darwin 20.6.0
     host CPU architecture           = arm64

   General build flags:
     CC                              = /opt/homebrew/Library/Homebrew/shims/mac/super/clang
     CXX                             = /opt/homebrew/Library/Homebrew/shims/mac/super/clang++
     CPPFLAGS                        =  -DMACOSX
     CFLAGS                          = 
     CXXFLAGS                        = 
     LDFLAGS                         = 

   XML parser library configuration:
     XML library                     = libxml2
     CPPFLAGS for XML                = -I/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/libxml2
     LIBS for XML                    = /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/lib/libxml2.tbd

   Other libSBML configuration settings:
     Installation $prefix            = /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty
--      Value of $DYLD_LIBRARY_PATH     = 
--      Using C++ namespace ('libsbml') = yes
--      Building 'universal' binaries   = no (using native arch)
-- 
--      Build examples                  = no
-- 
--      Use Legacy Math                 = no
-- 
--    Support for SBML Level 3 Packages: 
--      SBML 'comp' package    = TRUE
--      SBML 'fbc' package     = OFF
--      SBML 'groups' package  = OFF
--      SBML 'layout' package  = OFF
--      SBML 'multi' package   = OFF
--      SBML 'qual' package    = OFF
--      SBML 'render' package  = OFF
-- 

-- Other potentially important settings:
--   Compression support is enabled for .zip and .gz files
--   Compression support is enabled for .bz2 files
-- 
----------------------------------------------------------------------
-- Configuring done (1.6s)
-- Generating done (0.1s)
-- Build files have been written to: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/build
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-configure
[ 44%] Performing build step for 'libSBML'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/build && /Library/Developer/CommandLineTools/usr/bin/make
[  1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/extension/CompSBasePlugin.cpp.o
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[  7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/CompFlatteningConverter.cpp.o
[  8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/util/SBMLFileResolver.cpp.o
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[  9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/comp/validator/CompConsistencyValidator.cpp.o
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[ 16%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.o
[ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.o
[ 17%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.o
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cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-build
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Install the project...
-- Install configuration: "Release"
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/share/libsbml/COPYING.txt
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/share/libsbml/FUNDING.txt
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/share/libsbml/LICENSE.txt
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/share/libsbml/NEWS.txt
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/share/libsbml/OLD_NEWS.txt
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/share/libsbml/README.txt
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/share/libsbml/VERSION.txt
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/lib/pkgconfig/libsbml.pc
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/common/CompExtensionTypes.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/common/compfwd.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/extension/CompExtension.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/extension/CompModelPlugin.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/extension/CompSBMLDocumentPlugin.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/extension/CompSBasePlugin.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/CompBase.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/Deletion.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/ExternalModelDefinition.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/ListOfDeletions.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/ListOfExternalModelDefinitions.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/ListOfModelDefinitions.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/ListOfPorts.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/ListOfReplacedElements.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/ListOfSubmodels.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/ModelDefinition.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/Port.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/ReplacedBy.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/ReplacedElement.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/Replacing.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/SBaseRef.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/sbml/Submodel.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/util/CompFlatteningConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/util/SBMLFileResolver.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/util/SBMLResolver.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/util/SBMLResolverRegistry.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/util/SBMLUri.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/CompConsistencyValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/CompIdentifierConsistencyValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/CompSBMLError.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/CompSBMLErrorTable.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/CompUnitConsistencyValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/CompValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/ClassReplacements.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/CompIdBase.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/ExtModelReferenceCycles.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/PackageIdReplacementCheck.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/SubmodelReferenceCycles.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/UniqueCompIdBase.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/UniqueComponentIds.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/UniqueModelIds.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/UniquePortIds.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/UniquePortReferences.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/UniqueReplacedReferences.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/packages/comp/validator/constraints/UnitReplacementCheck.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/annotation/CVTerm.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/annotation/Date.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/annotation/ModelCreator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/annotation/ModelHistory.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/annotation/RDFAnnotation.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/annotation/RDFAnnotationParser.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/common-documentation.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/common-sbmlerror-codes.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/common.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/extern.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/libsbml-config-common.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/libsbml-config.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/libsbml-namespace.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/libsbml-package.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/libsbml-version.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/operationReturnValues.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/sbmlfwd.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/CompressCommon.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/InputDecompressor.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/OutputCompressor.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/bzfstream.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/crypt.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/ioapi.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/ioapi_mem.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/iowin32.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/unzip.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/zfstream.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/zip.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/compress/zipfstream.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/ConversionOption.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/ConversionProperties.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLConverterRegister.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLConverterRegistry.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLConverterTypes.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLFunctionDefinitionConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLIdConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLInferUnitsConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLInitialAssignmentConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLLevel1Version1Converter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLLevelVersionConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLLocalParameterConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLRateOfConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLReactionConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLRuleConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLStripPackageConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/conversion/SBMLUnitsConverter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/ASTBasePlugin.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/ISBMLExtensionNamespaces.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/SBMLDocumentPlugin.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/SBMLDocumentPluginNotRequired.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/SBMLExtension.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/SBMLExtensionException.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/SBMLExtensionNamespaces.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/SBMLExtensionRegister.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/SBMLExtensionRegistry.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/SBaseExtensionPoint.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/SBasePlugin.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/SBasePluginCreator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/SBasePluginCreatorBase.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/units/FormulaUnitsData.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/units/UnitFormulaFormatter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/units/UnitKindList.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/util/ElementFilter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/util/IdFilter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/util/IdList.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/util/IdentifierTransformer.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/util/List.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/util/MetaIdFilter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/util/PrefixTransformer.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/util/Stack.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/util/StringBuffer.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/util/memory.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/util/util.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/ConsistencyValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/ConstraintMacros.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/IdentifierConsistencyValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/InternalConsistencyValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/L1CompatibilityValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/L2v1CompatibilityValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/L2v2CompatibilityValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/L2v3CompatibilityValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/L2v4CompatibilityValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/L3v1CompatibilityValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/L3v2CompatibilityValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/MathMLConsistencyValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/ModelingPracticeValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/OverdeterminedValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/SBMLExternalValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/SBMLInternalValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/SBMLValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/SBOConsistencyValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/StrictUnitConsistencyValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/UnitConsistencyValidator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/VConstraint.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/validator/Validator.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/ExpatAttributes.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/ExpatHandler.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/ExpatParser.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/LibXMLAttributes.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/LibXMLHandler.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/LibXMLNamespaces.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/LibXMLParser.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/LibXMLTranscode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLAttributes.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLBuffer.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLConstructorException.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLError.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLErrorLog.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLExtern.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLFileBuffer.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLHandler.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLInputStream.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLLogOverride.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLMemoryBuffer.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLNamespaces.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLOutputStream.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLParser.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLToken.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLTokenizer.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XMLTriple.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XercesAttributes.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XercesHandler.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XercesNamespaces.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XercesParser.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/xml/XercesTranscode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/AlgebraicRule.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/AssignmentRule.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Compartment.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/CompartmentType.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Constraint.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Delay.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Event.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/EventAssignment.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/ExpectedAttributes.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/FunctionDefinition.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/InitialAssignment.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/KineticLaw.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/ListOf.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/LocalParameter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Model.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/ModifierSpeciesReference.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Parameter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Priority.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/RateRule.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Reaction.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Rule.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLConstructorException.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLDocument.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLError.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLErrorLog.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLErrorTable.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLNamespaces.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLReader.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLTransforms.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLTypeCodes.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLTypes.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLVisitor.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBMLWriter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBO.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SBase.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SimpleSpeciesReference.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Species.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SpeciesReference.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SpeciesType.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/StoichiometryMath.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/SyntaxChecker.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Trigger.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/Unit.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/UnitDefinition.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/UnitKind.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/libsbml-config-common.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/libsbml-config-packages.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/libsbml-namespace.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/libsbml-package.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/common/libsbml-version.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/extension/RegisterExtensions.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTBase.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTBinaryFunctionNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCSymbol.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCSymbolAvogadroNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCSymbolDelayNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCSymbolRateOfNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCSymbolTimeNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCiFunctionNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCiNumberNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCnBase.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCnExponentialNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCnIntegerNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCnRationalNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTCnRealNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTConstantNumberNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTFunction.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTFunctionBase.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTLambdaFunctionNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTNaryFunctionNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTNumber.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTPiecewiseFunctionNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTQualifierNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTSemanticsNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTTypes.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/ASTUnaryFunctionNode.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/FormulaFormatter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/FormulaParser.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/FormulaTokenizer.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/L3FormulaFormatter.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/L3Parser.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/L3ParserSettings.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/include/sbml/math/MathML.h
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/lib/libsbml-static.a
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/lib/cmake/sbml-static-config.cmake
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/lib/cmake/sbml-static-config-release.cmake
-- Installing: /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/lib/cmake/sbml-static-config-version.cmake
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-install
[ 44%] No test step for 'libSBML'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E echo_append
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/build && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-test
[ 44%] Completed 'libSBML'
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E make_directory /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/CMakeFiles
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/CMakeFiles/libSBML-complete
cd /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML && /opt/homebrew/Cellar/cmake/3.26.1/bin/cmake -E touch /tmp/morpheus-20230328-83970-2nrvbc/morpheus-ec371c66f6c245485ad013ac9cfa502cbe37f198/3rdparty/libSBML/libSBML-prefix/src/libSBML-stamp/libSBML-done
[ 44%] Built target libSBML
make: *** [all] Error 2

HOMEBREW_VERSION: 4.0.10
ORIGIN: https://github.com/Homebrew/brew
HEAD: cf6614b50eac1c9f4bf386dc6989f0d443148df8
Last commit: 27 hours ago
Core tap JSON: 28 Mar 16:40 UTC
HOMEBREW_PREFIX: /opt/homebrew
HOMEBREW_CASK_OPTS: []
HOMEBREW_MAKE_JOBS: 8
HOMEBREW_NO_BOOTSNAP: set
Homebrew Ruby: 2.6.8 => /opt/homebrew/Library/Homebrew/vendor/portable-ruby/2.6.8_1/bin/ruby
CPU: octa-core 64-bit arm_firestorm_icestorm
Clang: 13.0.0 build 1300
Git: 2.32.0 => /Library/Developer/CommandLineTools/usr/bin/git
Curl: 7.64.1 => /usr/bin/curl
macOS: 11.5.2-arm64
CLT: 13.2.0.0.1.1637719136
Xcode: N/A
Rosetta 2: false

HOMEBREW_CC: clang
HOMEBREW_CXX: clang++
MAKEFLAGS: -j8
CMAKE_PREFIX_PATH: /opt/homebrew/opt/openssl@1.1:/opt/homebrew/opt/icu4c:/opt/homebrew/opt/libarchive:/opt/homebrew/opt/qt@5:/opt/homebrew/opt/readline:/opt/homebrew/opt/m4:/opt/homebrew/opt/libomp:/opt/homebrew
CMAKE_INCLUDE_PATH: /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/OpenGL.framework/Versions/Current/Headers
CMAKE_LIBRARY_PATH: /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/System/Library/Frameworks/OpenGL.framework/Versions/Current/Libraries
CMAKE_FRAMEWORK_PATH: /opt/homebrew/opt/qt@5/Frameworks
PKG_CONFIG_PATH: /opt/homebrew/opt/brotli/lib/pkgconfig:/opt/homebrew/opt/highway/lib/pkgconfig:/opt/homebrew/opt/imath/lib/pkgconfig:/opt/homebrew/opt/jpeg-turbo/lib/pkgconfig:/opt/homebrew/opt/libpng/lib/pkgconfig:/opt/homebrew/opt/lz4/lib/pkgconfig:/opt/homebrew/opt/xz/lib/pkgconfig:/opt/homebrew/opt/zstd/lib/pkgconfig:/opt/homebrew/opt/libtiff/lib/pkgconfig:/opt/homebrew/opt/little-cms2/lib/pkgconfig:/opt/homebrew/opt/openexr/lib/pkgconfig:/opt/homebrew/opt/webp/lib/pkgconfig:/opt/homebrew/opt/jpeg-xl/lib/pkgconfig:/opt/homebrew/opt/libvmaf/lib/pkgconfig:/opt/homebrew/opt/aom/lib/pkgconfig:/opt/homebrew/opt/aribb24/lib/pkgconfig:/opt/homebrew/opt/dav1d/lib/pkgconfig:/opt/homebrew/opt/freetype/lib/pkgconfig:/opt/homebrew/opt/fontconfig/lib/pkgconfig:/opt/homebrew/opt/frei0r/lib/pkgconfig:/opt/homebrew/opt/gmp/lib/pkgconfig:/opt/homebrew/opt/libidn2/lib/pkgconfig:/opt/homebrew/opt/libtasn1/lib/pkgconfig:/opt/homebrew/opt/nettle/lib/pkgconfig:/opt/homebrew/opt/p11-kit/lib/pkgconfig:/opt/homebrew/opt/openssl@1.1/lib/pkgconfig:/opt/homebrew/opt/libevent/lib/pkgconfig:/opt/homebrew/opt/libnghttp2/lib/pkgconfig:/opt/homebrew/opt/unbound/lib/pkgconfig:/opt/homebrew/opt/gnutls/lib/pkgconfig:/opt/homebrew/opt/fribidi/lib/pkgconfig:/opt/homebrew/opt/pcre2/lib/pkgconfig:/opt/homebrew/opt/glib/lib/pkgconfig:/opt/homebrew/opt/libxau/lib/pkgconfig:/opt/homebrew/opt/libxdmcp/lib/pkgconfig:/opt/homebrew/opt/libxcb/lib/pkgconfig:/opt/homebrew/opt/libx11/lib/pkgconfig:/opt/homebrew/opt/libxext/lib/pkgconfig:/opt/homebrew/opt/libxrender/lib/pkgconfig:/opt/homebrew/opt/lzo/lib/pkgconfig:/opt/homebrew/opt/pixman/lib/pkgconfig:/opt/homebrew/opt/cairo/lib/pkgconfig:/opt/homebrew/opt/graphite2/lib/pkgconfig:/opt/homebrew/opt/icu4c/lib/pkgconfig:/opt/homebrew/opt/harfbuzz/lib/pkgconfig:/opt/homebrew/opt/libunibreak/lib/pkgconfig:/opt/homebrew/opt/libass/lib/pkgconfig:/opt/homebrew/opt/libbluray/lib/pkgconfig:/opt/homebrew/opt/cjson/lib/pkgconfig:/opt/homebrew/opt/librist/lib/pkgconfig:/opt/homebrew/opt/libsoxr/lib/pkgconfig:/opt/homebrew/opt/libvidstab/lib/pkgconfig:/opt/homebrew/opt/libogg/lib/pkgconfig:/opt/homebrew/opt/libvorbis/lib/pkgconfig:/opt/homebrew/opt/libvpx/lib/pkgconfig:/opt/homebrew/opt/opencore-amr/lib/pkgconfig:/opt/homebrew/opt/openjpeg/lib/pkgconfig:/opt/homebrew/opt/opus/lib/pkgconfig:/opt/homebrew/opt/rav1e/lib/pkgconfig:/opt/homebrew/opt/libsamplerate/lib/pkgconfig:/opt/homebrew/opt/flac/lib/pkgconfig:/opt/homebrew/opt/mpg123/lib/pkgconfig:/opt/homebrew/opt/libsndfile/lib/pkgconfig:/opt/homebrew/opt/rubberband/lib/pkgconfig:/opt/homebrew/opt/sdl2/lib/pkgconfig:/opt/homebrew/opt/speex/lib/pkgconfig:/opt/homebrew/opt/srt/lib/pkgconfig:/opt/homebrew/opt/svt-av1/lib/pkgconfig:/opt/homebrew/opt/leptonica/lib/pkgconfig:/opt/homebrew/opt/libb2/lib/pkgconfig:/opt/homebrew/opt/libarchive/lib/pkgconfig:/opt/homebrew/opt/pango/lib/pkgconfig:/opt/homebrew/opt/tesseract/lib/pkgconfig:/opt/homebrew/opt/theora/lib/pkgconfig:/opt/homebrew/opt/x264/lib/pkgconfig:/opt/homebrew/opt/x265/lib/pkgconfig:/opt/homebrew/opt/libsodium/lib/pkgconfig:/opt/homebrew/opt/zeromq/lib/pkgconfig:/opt/homebrew/opt/zimg/lib/pkgconfig:/opt/homebrew/opt/ffmpeg/lib/pkgconfig:/opt/homebrew/opt/libavif/lib/pkgconfig:/opt/homebrew/opt/gd/lib/pkgconfig:/opt/homebrew/opt/libcerf/lib/pkgconfig:/opt/homebrew/opt/lua/lib/pkgconfig:/opt/homebrew/opt/qt@5/lib/pkgconfig:/opt/homebrew/opt/readline/lib/pkgconfig:/opt/homebrew/opt/jasper/lib/pkgconfig:/opt/homebrew/opt/netpbm/lib/pkgconfig:/opt/homebrew/opt/gts/lib/pkgconfig:/opt/homebrew/opt/gdk-pixbuf/lib/pkgconfig:/opt/homebrew/opt/librsvg/lib/pkgconfig:/opt/homebrew/opt/graphviz/lib/pkgconfig:/opt/homebrew/opt/xorgproto/share/pkgconfig
PKG_CONFIG_LIBDIR: /usr/lib/pkgconfig:/opt/homebrew/Library/Homebrew/os/mac/pkgconfig/11
HOMEBREW_GIT: git
HOMEBREW_SDKROOT: /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk
ACLOCAL_PATH: /opt/homebrew/share/aclocal
PATH: /opt/homebrew/Library/Homebrew/shims/mac/super:/opt/homebrew/opt/cmake/bin:/opt/homebrew/opt/doxygen/bin:/opt/homebrew/opt/brotli/bin:/opt/homebrew/opt/giflib/bin:/opt/homebrew/opt/jpeg-turbo/bin:/opt/homebrew/opt/libpng/bin:/opt/homebrew/opt/lz4/bin:/opt/homebrew/opt/xz/bin:/opt/homebrew/opt/zstd/bin:/opt/homebrew/opt/libtiff/bin:/opt/homebrew/opt/little-cms2/bin:/opt/homebrew/opt/openexr/bin:/opt/homebrew/opt/webp/bin:/opt/homebrew/opt/jpeg-xl/bin:/opt/homebrew/opt/libvmaf/bin:/opt/homebrew/opt/aom/bin:/opt/homebrew/opt/dav1d/bin:/opt/homebrew/opt/freetype/bin:/opt/homebrew/opt/fontconfig/bin:/opt/homebrew/opt/gettext/bin:/opt/homebrew/opt/libidn2/bin:/opt/homebrew/opt/libtasn1/bin:/opt/homebrew/opt/nettle/bin:/opt/homebrew/opt/p11-kit/bin:/opt/homebrew/opt/openssl@1.1/bin:/opt/homebrew/opt/libevent/bin:/opt/homebrew/opt/gnutls/bin:/opt/homebrew/opt/lame/bin:/opt/homebrew/opt/fribidi/bin:/opt/homebrew/opt/pcre2/bin:/opt/homebrew/opt/glib/bin:/opt/homebrew/opt/cairo/bin:/opt/homebrew/opt/graphite2/bin:/opt/homebrew/opt/icu4c/bin:/opt/homebrew/opt/harfbuzz/bin:/opt/homebrew/opt/libbluray/bin:/opt/homebrew/opt/mbedtls/bin:/opt/homebrew/opt/librist/bin:/opt/homebrew/opt/openjpeg/bin:/opt/homebrew/opt/rav1e/bin:/opt/homebrew/opt/flac/bin:/opt/homebrew/opt/mpg123/bin:/opt/homebrew/opt/libsndfile/bin:/opt/homebrew/opt/rubberband/bin:/opt/homebrew/opt/sdl2/bin:/opt/homebrew/opt/speex/bin:/opt/homebrew/opt/srt/bin:/opt/homebrew/opt/svt-av1/bin:/opt/homebrew/opt/leptonica/bin:/opt/homebrew/opt/libarchive/bin:/opt/homebrew/opt/pango/bin:/opt/homebrew/opt/tesseract/bin:/opt/homebrew/opt/x264/bin:/opt/homebrew/opt/x265/bin:/opt/homebrew/opt/zeromq/bin:/opt/homebrew/opt/ffmpeg/bin:/opt/homebrew/opt/libavif/bin:/opt/homebrew/opt/gd/bin:/opt/homebrew/opt/lua/bin:/opt/homebrew/opt/qt@5/bin:/opt/homebrew/opt/gnuplot/bin:/opt/homebrew/opt/jasper/bin:/opt/homebrew/opt/netpbm/bin:/opt/homebrew/opt/gts/bin:/opt/homebrew/opt/gdk-pixbuf/bin:/opt/homebrew/opt/librsvg/bin:/opt/homebrew/opt/m4/bin:/opt/homebrew/opt/libtool/bin:/opt/homebrew/opt/graphviz/bin:/usr/bin:/bin:/usr/sbin:/sbin
(base) lin@Lins-Air ~ % 

[jdieg0]

Hi @lllllin001,

thank you very much for the full log. This bug is caused by a change in an external library that Morpheus uses. This will be fixed in the next Morpheus release.

In the meantime, there are two ways to install Morpheus on your Mac:

1. Your brew config states that you have an M1 Mac with macOS 11.5.2 (Big Sur) installed. We provide pre-built binary packages (called ‘Bottles’ in Homebrew) of Morpheus for M1 machines with the most recent macOS release. If you upgrade your system to macOS 13 (Ventura) und repeat brew install morpheus, the pre-built bottle will be chosen and you should get Morpheus up and running without errors.
2. We've already fixed the issue in the current release branch. You can install this preliminary development state of Morpheus for your existing macOS version with brew tap morpheus-lab/morpheus-versions + brew install --HEAD morpheus-release (see also the FAQ for details, e.g. how to upgrade such a development version).

Best, Diego

[lllllin001]

Dear Diego,

I updated my macOS system (using the first approach), and it WORKED!!

Thanks so much :)