Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneity. Pairtree focuses on scaling to many more cancer samples and cancer cell subpopulations than other algorithms, and on producing concise and informative interactive characterizations of posterior uncertainty.
Fixes https://github.com/morrislab/pairtree/issues/7 by replacing the
progressbarmodule andprogressbarcalls withtqdm.