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morrislab / phylowgs

Application for inferring subclonal composition and evolution from whole-genome sequencing data.
GNU General Public License v3.0
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TitanCNA has changed the column names. #113

Open b-niu opened 5 years ago

b-niu commented 5 years ago

Dear all,

At present, TitanCNA has changed the column names in their output files. So, the parser will throw out "KeyError: 'Start_Position(bp)'" etc.

I have made some changes in the parse_cnvs.py. The old column names have been changed to the new ones. Wish it may be helpful.

If an example file is needed, I can provide it.

Thanks.